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java.lang.Objectorg.jmol.modelset.Polymer
org.jmol.modelsetbio.BioPolymer
org.jmol.modelsetbio.PhosphorusPolymer
class PhosphorusPolymer
Field Summary |
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Fields inherited from class org.jmol.modelsetbio.BioPolymer |
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bsSelectedMonomers, hasWingPoints, haveParameters, invalidControl, monomers, sheetSmoothing |
Fields inherited from class org.jmol.modelset.Polymer |
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bioPolymerIndexInModel, controlPoints, leadAtomIndices, leadMidpoints, leadPoints, model, monomerCount, type, TYPE_AMINO, TYPE_CARBOHYDRATE, TYPE_NOBONDING, TYPE_NUCLEIC, wingVectors |
Constructor Summary | |
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PhosphorusPolymer(Monomer[] monomers)
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Method Summary | |
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void |
getPdbData(Viewer viewer,
char ctype,
char qtype,
int mStep,
int derivType,
boolean isDraw,
BitSet bsAtoms,
OutputStringBuffer pdbATOM,
StringBuffer pdbCONECT,
BitSet bsSelected,
boolean addHeader,
boolean bothEnds,
BitSet bsWritten)
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Methods inherited from class org.jmol.modelset.Polymer |
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addSecondaryStructure, calcRasmolHydrogenBonds, calculateStructures, calculateStruts, getType, setStructureList |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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PhosphorusPolymer(Monomer[] monomers)
Method Detail |
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public void getPdbData(Viewer viewer, char ctype, char qtype, int mStep, int derivType, boolean isDraw, BitSet bsAtoms, OutputStringBuffer pdbATOM, StringBuffer pdbCONECT, BitSet bsSelected, boolean addHeader, boolean bothEnds, BitSet bsWritten)
getPdbData
in class Polymer
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