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java.lang.Objectorg.jmol.jvxl.readers.SurfaceReader
org.jmol.jvxl.readers.SurfaceFileReader
org.jmol.jvxl.readers.VolumeFileReader
org.jmol.jvxl.readers.MapFileReader
org.jmol.jvxl.readers.XplorReader
class XplorReader
Field Summary | |
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private int |
linePt
|
private int |
nBlock
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private int |
nRead
|
Fields inherited from class org.jmol.jvxl.readers.MapFileReader |
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a, adjustment, alpha, b, beta, c, dmax, dmean, dmin, drange, gamma, mapc, mapr, maps, mode, na, nb, nc, nx, nxyzStart, ny, nz, origin, vectors |
Fields inherited from class org.jmol.jvxl.readers.VolumeFileReader |
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atomCount, boundingBox, canDownsample, endOfData, isAngstroms, negativeAtomCount, nSurfaces, readerClosed, thePlane |
Fields inherited from class org.jmol.jvxl.readers.SurfaceFileReader |
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binarydoc, br, line, next, os |
Constructor Summary | |
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XplorReader(SurfaceGenerator sg,
BufferedReader br)
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Method Summary | |
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private String |
getLine()
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protected float |
nextVoxel()
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protected void |
readParameters()
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Methods inherited from class org.jmol.jvxl.readers.MapFileReader |
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getVectorsAndOrigin, setCutoffAutomatic |
Methods inherited from class org.jmol.jvxl.readers.VolumeFileReader |
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checkAtomLine, closeReader, getNextVoxelValue, getPlane, getValue, getVoxelBitSet, gotoData, readSurfaceData, readVolumeData, readVolumeParameters, readVoxelVector, recordData, skipComments, skipData |
Methods inherited from class org.jmol.jvxl.readers.SurfaceFileReader |
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discardTempData, getNextQuotedString, getTokens, parseFloat, parseFloat, parseFloatArray, parseFloatArray, parseInt, parseInt, parseIntNext, readLine, setOutputStream, skipTo |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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private int nBlock
private int linePt
private int nRead
Constructor Detail |
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XplorReader(SurfaceGenerator sg, BufferedReader br)
Method Detail |
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protected void readParameters() throws Exception
readParameters
in class VolumeFileReader
Exception
private String getLine() throws Exception
Exception
protected float nextVoxel() throws Exception
nextVoxel
in class VolumeFileReader
Exception
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