Table of Contents


Everything

Modules

PyDSTool
PyDSTool.Events
PyDSTool.FuncSpec'
PyDSTool.Generator
PyDSTool.Generator.ADMC_ODEsystem'
PyDSTool.Generator.DDEsystem
PyDSTool.Generator.Dopri_ODEsystem'
PyDSTool.Generator.EmbeddedSysGen'
PyDSTool.Generator.Euler_ODEsystem'
PyDSTool.Generator.ExplicitFnGen'
PyDSTool.Generator.ExtrapolateTable'
PyDSTool.Generator.ImplicitFnGen'
PyDSTool.Generator.InterpolateTable'
PyDSTool.Generator.LookupTable'
PyDSTool.Generator.MapSystem'
PyDSTool.Generator.ODEsystem'
PyDSTool.Generator.Radau_ODEsystem'
PyDSTool.Generator.Vode_ODEsystem'
PyDSTool.Generator.allimports
PyDSTool.Generator.baseclasses
PyDSTool.Generator.messagecodes
PyDSTool.Interval'
PyDSTool.MProject
PyDSTool.Model
PyDSTool.ModelConstructor'
PyDSTool.ModelSpec'
PyDSTool.Points
PyDSTool.PyCont
PyDSTool.PyCont.BifPoint
PyDSTool.PyCont.ContClass'
PyDSTool.PyCont.Continuation
PyDSTool.PyCont.Plotting
PyDSTool.PyCont.TestFunc
PyDSTool.PyCont.misc
PyDSTool.Redirector
PyDSTool.Symbolic
PyDSTool.Toolbox
PyDSTool.Toolbox.ActivationFuncs
PyDSTool.Toolbox.DSSRT_tools
PyDSTool.Toolbox.FR
PyDSTool.Toolbox.FSM
PyDSTool.Toolbox.InputProfile
PyDSTool.Toolbox.ModelEst
PyDSTool.Toolbox.ModelHelper
PyDSTool.Toolbox.NineML
PyDSTool.Toolbox.PRCtools
PyDSTool.Toolbox.ParamEst
PyDSTool.Toolbox.PySCes_SBML
PyDSTool.Toolbox.adjointPRC
PyDSTool.Toolbox.data_analysis
PyDSTool.Toolbox.dssrt
PyDSTool.Toolbox.event_driven_simulator
PyDSTool.Toolbox.fracdim
PyDSTool.Toolbox.makeSloppyModel
PyDSTool.Toolbox.mechmatlib
PyDSTool.Toolbox.model_primitives
PyDSTool.Toolbox.neuralcomp
PyDSTool.Toolbox.neuro_data
PyDSTool.Toolbox.optimizers
PyDSTool.Toolbox.optimizers.criterion
PyDSTool.Toolbox.optimizers.criterion.composite_criteria
PyDSTool.Toolbox.optimizers.criterion.criteria
PyDSTool.Toolbox.optimizers.criterion.facilities
PyDSTool.Toolbox.optimizers.criterion.information_criteria
PyDSTool.Toolbox.optimizers.defaults
PyDSTool.Toolbox.optimizers.helpers
PyDSTool.Toolbox.optimizers.helpers.finite_difference
PyDSTool.Toolbox.optimizers.helpers.levenberg_marquardt
PyDSTool.Toolbox.optimizers.helpers.quadratic
PyDSTool.Toolbox.optimizers.line_search
PyDSTool.Toolbox.optimizers.line_search.adaptive_last_step_modifier
PyDSTool.Toolbox.optimizers.line_search.backtracking_search
PyDSTool.Toolbox.optimizers.line_search.barzilai_borwein_non_monotone_search
PyDSTool.Toolbox.optimizers.line_search.barzilai_borwein_search
PyDSTool.Toolbox.optimizers.line_search.cubic_interpolation
PyDSTool.Toolbox.optimizers.line_search.damped_line_search
PyDSTool.Toolbox.optimizers.line_search.fibonacci_section
PyDSTool.Toolbox.optimizers.line_search.fixed_last_step_modifier
PyDSTool.Toolbox.optimizers.line_search.golden_section
PyDSTool.Toolbox.optimizers.line_search.goldstein_rule
PyDSTool.Toolbox.optimizers.line_search.hyperbolic_line_search
PyDSTool.Toolbox.optimizers.line_search.quadratic_interpolation
PyDSTool.Toolbox.optimizers.line_search.scaled_line_search
PyDSTool.Toolbox.optimizers.line_search.simple_line_search
PyDSTool.Toolbox.optimizers.line_search.strong_wolfe_powell_rule
PyDSTool.Toolbox.optimizers.line_search.wolfe_powell_rule
PyDSTool.Toolbox.optimizers.optimizer
PyDSTool.Toolbox.optimizers.optimizer.optimizer
PyDSTool.Toolbox.optimizers.optimizer.standard_optimizer
PyDSTool.Toolbox.optimizers.optimizer.standard_optimizer_modifying
PyDSTool.Toolbox.optimizers.step
PyDSTool.Toolbox.optimizers.step.conjugate_gradient_step
PyDSTool.Toolbox.optimizers.step.goldfeld_step
PyDSTool.Toolbox.optimizers.step.goldstein_price_step
PyDSTool.Toolbox.optimizers.step.gradient_step
PyDSTool.Toolbox.optimizers.step.local_brute_force_1dstep
PyDSTool.Toolbox.optimizers.step.marquardt_step
PyDSTool.Toolbox.optimizers.step.newton_step
PyDSTool.Toolbox.optimizers.step.partial_step
PyDSTool.Toolbox.optimizers.step.quasi_newton_step
PyDSTool.Toolbox.optimizers.step.restart_conjugate_gradient
PyDSTool.Toolbox.optimizers.tests
PyDSTool.Toolbox.optimizers.tests.test_powell
PyDSTool.Toolbox.optimizers.tests.test_quadratic
PyDSTool.Toolbox.optimizers.tests.test_rosenbrock
PyDSTool.Toolbox.phaseplane
PyDSTool.Toolbox.prep_boxplot
PyDSTool.Toolbox.synthetic_data
PyDSTool.Toolbox.syntheticdata
PyDSTool.Toolbox.test_protocols
PyDSTool.Trajectory'
PyDSTool.Variable'
PyDSTool.common
PyDSTool.conf
PyDSTool.errors
PyDSTool.fixedpickle
PyDSTool.integrator'
PyDSTool.matplotlib_import
PyDSTool.parseUtils
PyDSTool.scipy_ode
PyDSTool.utils
cPickle
scipy.integrate.vode

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