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java.lang.Objectij.measure.Calibration
public class Calibration
Calibration objects contain an image's spatial and density calibration data.
Field Summary | |
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static int |
EXPONENTIAL
|
static int |
GAMMA_VARIATE
|
boolean |
invertY
Set true to display cartesian coordinates (not yet implemented). |
static int |
LOG
|
static int |
NONE
|
double |
pixelDepth
Pixel depth in 'unit's |
double |
pixelHeight
Pixel height in 'unit's |
double |
pixelWidth
Pixel width in 'unit's |
static int |
POLY2
|
static int |
POLY3
|
static int |
POLY4
|
static int |
POWER
|
static int |
RODBARD
|
static int |
STRAIGHT_LINE
|
static int |
UNCALIBRATED_OD
|
int |
xOrigin
X origin in pixels. |
int |
yOrigin
Y origin in pixels. |
Constructor Summary | |
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Calibration()
Constructs a new Calibration object using the default values. |
|
Calibration(ImagePlus imp)
Constructs a new Calibration object using the default values. |
Method Summary | |
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boolean |
calibrated()
Returns true if this image is density calibrated. |
Calibration |
copy()
Returns a clone of this object. |
void |
disableDensityCalibration()
|
double[] |
getCoefficients()
Returns the calibration function coefficients. |
float[] |
getCTable()
Returns the calibration table. |
double |
getCValue(int value)
Converts a raw pixel value to a density calibrated value. |
int |
getFunction()
Returns the calibration function ID. |
java.lang.String |
getUnit()
Returns the distance unit (e.g. |
java.lang.String |
getUnits()
Returns the plural form of the distance unit (e.g. |
java.lang.String |
getValueUnit()
Returns the density unit. |
double |
getX(int x)
Convertes an x-coodinate in pixels to physical units (e.g. |
double |
getY(int y)
Convertes an x-coodinate in pixels to physical units (e.g. |
boolean |
scaled()
Returns true if this image is spatially calibrated. |
void |
setFunction(int function,
double[] coefficients,
java.lang.String unit)
Sets the calibration function, coefficient table and unit (e.g. |
void |
setUnit(java.lang.String unit)
Sets the distance unit (e.g. |
java.lang.String |
toString()
|
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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public static final int STRAIGHT_LINE
public static final int POLY2
public static final int POLY3
public static final int POLY4
public static final int EXPONENTIAL
public static final int POWER
public static final int LOG
public static final int RODBARD
public static final int GAMMA_VARIATE
public static final int NONE
public static final int UNCALIBRATED_OD
public double pixelWidth
public double pixelHeight
public double pixelDepth
public int xOrigin
public int yOrigin
public boolean invertY
Constructor Detail |
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public Calibration(ImagePlus imp)
public Calibration()
Method Detail |
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public boolean scaled()
public void setUnit(java.lang.String unit)
public java.lang.String getUnit()
public java.lang.String getUnits()
public double getX(int x)
public double getY(int y)
public void setFunction(int function, double[] coefficients, java.lang.String unit)
public void disableDensityCalibration()
public java.lang.String getValueUnit()
public double[] getCoefficients()
public boolean calibrated()
public int getFunction()
public float[] getCTable()
public double getCValue(int value)
public Calibration copy()
public java.lang.String toString()
toString
in class java.lang.Object
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