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Packages that use PairwiseSequenceRenderer | |
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org.biojava.bio.gui.sequence | Graphical displays of biological sequences and associated annotations. |
Uses of PairwiseSequenceRenderer in org.biojava.bio.gui.sequence |
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Classes in org.biojava.bio.gui.sequence that implement PairwiseSequenceRenderer | |
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class |
CrosshairRenderer
CrosshairRenderer draws a crosshair, optionally
with coordinates. |
class |
PairwiseDiagonalRenderer
PairwiseDiagonalRenderer renders a region of
similarity between two sequences as a straight line. |
class |
PairwiseFilteringRenderer
PairwiseFilteringRenderer wraps a
PairwiseSequenceRenderer and filters the
PairwiseRenderContext s passed to it. |
class |
PairwiseOverlayRenderer
PairwiseOverlayRenderer allows a list of other
PairwiseSequenceRenderer s to superimpose their
output. |
Methods in org.biojava.bio.gui.sequence that return PairwiseSequenceRenderer | |
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PairwiseSequenceRenderer |
PairwiseFilteringRenderer.getRenderer()
getRenderer return the current renderer. |
PairwiseSequenceRenderer |
PairwiseSequencePanel.getRenderer()
getRenderer returns the current
PairwiseSequenceRenderer . |
Methods in org.biojava.bio.gui.sequence with parameters of type PairwiseSequenceRenderer | |
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protected void |
PairwiseOverlayRenderer._addRenderer(PairwiseSequenceRenderer renderer)
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protected void |
PairwiseOverlayRenderer._removeRenderer(PairwiseSequenceRenderer renderer)
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void |
PairwiseOverlayRenderer.addRenderer(PairwiseSequenceRenderer renderer)
addRenderer adds a renderer. |
void |
PairwiseOverlayRenderer.removeRenderer(PairwiseSequenceRenderer renderer)
removeRenderer removes a renderer. |
void |
PairwiseFilteringRenderer.setRenderer(PairwiseSequenceRenderer renderer)
setRenderer sets the renderer. |
void |
PairwiseSequencePanel.setRenderer(PairwiseSequenceRenderer renderer)
setRenderer sets the current
PairwiseSequenceRenderer . |
Constructors in org.biojava.bio.gui.sequence with parameters of type PairwiseSequenceRenderer | |
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PairwiseFilteringRenderer(PairwiseSequenceRenderer renderer)
Creates a new PairwiseFilteringRenderer which uses
a filter which accepts all features. |
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PairwiseFilteringRenderer(PairwiseSequenceRenderer renderer,
FeatureFilter filter,
boolean recurse)
Creates a new PairwiseFilteringRenderer . |
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PairwiseSequenceRenderer.PairwiseRendererForwarder(PairwiseSequenceRenderer source,
ChangeSupport cs)
Creates a new PairwiseRendererForwarder . |
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