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Packages that use Compound | |
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org.biojava.bio.structure | Interfaces and classes for protein structure (PDB). |
Uses of Compound in org.biojava.bio.structure |
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Methods in org.biojava.bio.structure that return Compound | |
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Compound |
Compound.clone()
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Compound |
Structure.getCompoundById(String molId)
request a particular compound by its id |
Compound |
StructureImpl.getCompoundById(String molId)
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Compound |
Chain.getHeader()
Returns the Header ( a Compound object) for this chain. |
Compound |
ChainImpl.getHeader()
Returns the Header ( a Compound object) for this chain. |
Methods in org.biojava.bio.structure that return types with arguments of type Compound | |
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List<Compound> |
Structure.getCompounds()
get all the Compounds that are defined in the PDB Header |
List<Compound> |
StructureImpl.getCompounds()
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Methods in org.biojava.bio.structure with parameters of type Compound | |
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void |
Chain.setHeader(Compound molId)
Set the Header from the PDB file. |
void |
ChainImpl.setHeader(Compound mol)
Set the Header from the PDB file. |
Method parameters in org.biojava.bio.structure with type arguments of type Compound | |
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void |
Structure.setCompounds(List<Compound> molList)
set the compounts |
void |
StructureImpl.setCompounds(List<Compound> molList)
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