Uses of Interface
org.biojava.bio.program.homologene.OrthoPairSetFilter

Packages that use OrthoPairSetFilter
org.biojava.bio.program.homologene Support classes for Homologene data. 
 

Uses of OrthoPairSetFilter in org.biojava.bio.program.homologene
 

Classes in org.biojava.bio.program.homologene that implement OrthoPairSetFilter
static class OrthoPairSetFilter.AcceptAll
           
static class OrthoPairSetFilter.AllPairsInCollection
          all OrthoPairs must meet the requirement defined by filter.
static class OrthoPairSetFilter.And
           
static class OrthoPairSetFilter.ByMinIdentity
           
static class OrthoPairSetFilter.ByTaxon
           
static class OrthoPairSetFilter.Not
           
static class OrthoPairSetFilter.Or
           
static class OrthoPairSetFilter.SomePairsInCollection
          at least one OrthoPair must meet the requirement defined by filter.
static class OrthoPairSetFilter.Xor
           
 

Methods in org.biojava.bio.program.homologene with parameters of type OrthoPairSetFilter
 OrthoPairCollection AbstractOrthoPairCollection.filter(OrthoPairSetFilter filters)
           
 OrthoPairCollection HomologeneDB.filter(OrthoPairSetFilter filters)
          Filter the database for a specified group.
 OrthoPairCollection OrthoPairCollection.filter(OrthoPairSetFilter filters)
           
 

Constructors in org.biojava.bio.program.homologene with parameters of type OrthoPairSetFilter
OrthoPairSetFilter.And(OrthoPairSetFilter a, OrthoPairSetFilter b)
           
OrthoPairSetFilter.Not(OrthoPairSetFilter a)
           
OrthoPairSetFilter.Or(OrthoPairSetFilter a, OrthoPairSetFilter b)
           
OrthoPairSetFilter.Xor(OrthoPairSetFilter a, OrthoPairSetFilter b)