Package PyDSTool :: Package Toolbox :: Module ParamEst :: Class BoundMin
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Class BoundMin

source code

    object --+        
             |        
common.Utility --+    
                 |    
          ParamEst --+
                     |
                    BoundMin

Bounded minimization parameter and initial condition optimizer for one-dimensional DS trajectories. Fits 1 parameter only.

Uses SciPy.optimize fminbound algorithm.

Instance Methods [hide private]
 
__init__(self, **kw)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code
 
run(self, parConstraints, xtol=5e-05, maxiter=500, extra_args=(), verbose=False)
Run parameter estimation.
source code

Inherited from ParamEst: evaluate, find_logs, iterate, key_logged_residual, par_sensitivity, pars_array_to_dict, pars_dict_to_array, pars_to_ixs, resetParArgs, reset_log, setAlgParams, setFn, show_log_record, weighted_par_sensitivity

Inherited from object: __delattr__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __str__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, **kw)
(Constructor)

source code 

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__
(inherited documentation)

run(self, parConstraints, xtol=5e-05, maxiter=500, extra_args=(), verbose=False)

source code 

Run parameter estimation. Returns a dictionary:

'success' -> boolean 'pars_sol' -> fitted values of pars 'pars_orig' -> original values of optimized pars 'sys_sol' -> trajectory of best fit Model trajectory 'alg_results' -> all other algorithm information (list)

Overrides: ParamEst.run
(inherited documentation)