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S

s1 - Variable in class test.edu.uci.ics.jung.utils.CoordinateUtilsTest
 
s2 - Variable in class test.edu.uci.ics.jung.utils.CoordinateUtilsTest
 
samples.graph - package samples.graph
Provides sample graph code that may be of interest.
samples.graph.southern - package samples.graph.southern
 
samples.preview_new_graphdraw - package samples.preview_new_graphdraw
This module provides a new way of thinking about graph drawing.
samples.preview_new_graphdraw.event - package samples.preview_new_graphdraw.event
 
samples.preview_new_graphdraw.impl - package samples.preview_new_graphdraw.impl
 
samples.preview_new_graphdraw.impl.crooked - package samples.preview_new_graphdraw.impl.crooked
 
samples.preview_new_graphdraw.iter - package samples.preview_new_graphdraw.iter
 
samples.preview_new_graphdraw.iterablelayouts - package samples.preview_new_graphdraw.iterablelayouts
 
samples.preview_new_graphdraw.staticlayouts - package samples.preview_new_graphdraw.staticlayouts
 
samples.preview_new_graphdraw.test - package samples.preview_new_graphdraw.test
 
samples.preview_new_graphdraw.transform - package samples.preview_new_graphdraw.transform
 
SatelliteAnimatedPickingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
A version of the AnimatedPickingGraphMousePlugin that is for the SatelliteVisualizationViewer.
SatelliteAnimatedPickingGraphMousePlugin() - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteAnimatedPickingGraphMousePlugin
create an instance
SatelliteAnimatedPickingGraphMousePlugin(int) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteAnimatedPickingGraphMousePlugin
 
SatelliteRotatingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
Mouse events in the SatelliteView that match the modifiers will cause the Main view to rotate
SatelliteRotatingGraphMousePlugin() - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteRotatingGraphMousePlugin
 
SatelliteRotatingGraphMousePlugin(int) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteRotatingGraphMousePlugin
 
SatelliteScalingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
Overrides ScalingGraphMousePlugin so that mouse events in the satellite view will cause scaling in the main view
SatelliteScalingGraphMousePlugin(ScalingControl, int) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteScalingGraphMousePlugin
 
SatelliteScalingGraphMousePlugin(ScalingControl, int, float, float) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteScalingGraphMousePlugin
 
SatelliteShearingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
Overrides ShearingGraphMousePlugin so that mouse events in the satellite view cause shearing of the main view
SatelliteShearingGraphMousePlugin() - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteShearingGraphMousePlugin
 
SatelliteShearingGraphMousePlugin(int) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteShearingGraphMousePlugin
 
SatelliteTranslatingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
Overrides TranslatingGraphMousePlugin so that mouse events in the satellite view cause translating of the main view
SatelliteTranslatingGraphMousePlugin() - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteTranslatingGraphMousePlugin
 
SatelliteTranslatingGraphMousePlugin(int) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteTranslatingGraphMousePlugin
 
SatelliteViewDemo - Class in samples.graph
A graph displayed in a main and a satellite view.
SatelliteViewDemo() - Constructor for class samples.graph.SatelliteViewDemo
create an instance of a simple graph in two views with controls to demo the features.
SatelliteVisualizationViewer - Class in edu.uci.ics.jung.visualization.control
A VisualizationViewer that can act as a satellite view for another (master) VisualizationViewer.
SatelliteVisualizationViewer(VisualizationViewer, Layout, Renderer) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteVisualizationViewer
 
SatelliteVisualizationViewer(VisualizationViewer, Layout, Renderer, Dimension) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteVisualizationViewer
 
SatelliteVisualizationViewer(VisualizationViewer, VisualizationModel, Renderer) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteVisualizationViewer
 
SatelliteVisualizationViewer(VisualizationViewer, VisualizationModel, Renderer, Dimension) - Constructor for class edu.uci.ics.jung.visualization.control.SatelliteVisualizationViewer
 
satisfiesEdgeConstraint(ArchetypeGraph, Predicate) - Static method in class edu.uci.ics.jung.utils.PredicateUtils
Returns true if each edge in g satisfies p, and false otherwise.
satisfiesPredicate(Collection, Predicate) - Static method in class edu.uci.ics.jung.utils.PredicateUtils
Returns true if all elements of c satisfy p.
satisfiesVertexConstraint(ArchetypeGraph, Predicate) - Static method in class edu.uci.ics.jung.utils.PredicateUtils
Returns true if each vertex in g satisfies p, and false otherwise.
save(Graph, String) - Method in interface edu.uci.ics.jung.io.GraphFile
Save a graph to disk per the appropriate format
save(Graph, String) - Method in class edu.uci.ics.jung.io.GraphMLFile
 
save(Graph, PrintStream) - Method in class edu.uci.ics.jung.io.GraphMLFile
 
save(Graph, String) - Method in class edu.uci.ics.jung.io.MatrixFile
 
save(Graph, String) - Method in class edu.uci.ics.jung.io.PajekNetFile
Deprecated.
Writes graph to the file specified by filename in the Pajek NET format.
save(Graph, String, VertexStringer, NumberEdgeValue, VertexLocationFunction) - Method in class edu.uci.ics.jung.io.PajekNetWriter
Saves g to filename.
save(Graph, String, VertexStringer, NumberEdgeValue) - Method in class edu.uci.ics.jung.io.PajekNetWriter
 
save(Graph, String) - Method in class edu.uci.ics.jung.io.PajekNetWriter
Saves g to filename; no vertex labels are written out, and the edge weights are written as 1.0.
save(Graph, Writer) - Method in class edu.uci.ics.jung.io.PajekNetWriter
Saves g to w; no vertex labels are written out, and the edge weights are written as 1.0.
save(Graph, Writer, VertexStringer, NumberEdgeValue) - Method in class edu.uci.ics.jung.io.PajekNetWriter
 
save(Graph, Writer, VertexStringer, NumberEdgeValue, VertexLocationFunction) - Method in class edu.uci.ics.jung.io.PajekNetWriter
Writes graph to w.
saveDistribution(Histogram, String) - Static method in class edu.uci.ics.jung.statistics.DegreeDistributions
Saves the empirical degree distribution to a file in the ascii flat file where each line has the following format: <# of vertices with this degree>
savedViewTransformer - Variable in class edu.uci.ics.jung.visualization.transform.AbstractLensSupport
 
scale(VisualizationViewer, float, Point2D) - Method in class edu.uci.ics.jung.visualization.control.AbsoluteCrossoverScalingControl
scale to the absolute value passed as 'amount'.
scale(VisualizationViewer, float, Point2D) - Method in class edu.uci.ics.jung.visualization.control.CrossoverScalingControl
 
scale(VisualizationViewer, float, Point2D) - Method in class edu.uci.ics.jung.visualization.control.LayoutScalingControl
zoom the display in or out, depending on the direction of the mouse wheel motion.
scale(VisualizationViewer, float, Point2D) - Method in interface edu.uci.ics.jung.visualization.control.ScalingControl
zoom the display in or out
scale(VisualizationViewer, float, Point2D) - Method in class edu.uci.ics.jung.visualization.control.ViewScalingControl
zoom the display in or out, depending on the direction of the mouse wheel motion.
scale(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.transform.MutableAffineTransformer
setter for the scale fires a PropertyChangeEvent with the AffineTransforms representing the previous and new values for scale and offset
scale(double, double, Point2D) - Method in interface edu.uci.ics.jung.visualization.transform.MutableTransformer
 
scale(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.transform.MutableTransformerDecorator
 
scale(double, double) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
scale(VertexLocationFunction, double, double) - Static method in class edu.uci.ics.jung.visualization.VertexLocationUtils
 
scale(double, double) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Deprecated.
access via getViewTransformer method
scale(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Deprecated.
access via getViewTransformer method
scale(Dimension, Dimension) - Method in class samples.preview_new_graphdraw.Coordinates
 
scale(Coordinates, double, double) - Static method in class samples.preview_new_graphdraw.CoordinateUtil
 
scale(float, float) - Method in class scratch.scott.PSGr
Scales the graphics context.
scalePaint(Component) - Method in class scratch.scott.PSGr
Find scale factor that will fit the page, use smaller of x and y for both, to convert all pixels to points.
scaler - Variable in class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
controls scaling operations
scaleToLayout(Dimension) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
scalex - Variable in class edu.uci.ics.jung.visualization.BirdsEyeVisualizationViewer
Deprecated.
 
scalex - Variable in class edu.uci.ics.jung.visualization.Lens
Deprecated.
the scale of the BirdsEyeVisualizationViewer compared to the graph display
scaley - Variable in class edu.uci.ics.jung.visualization.BirdsEyeVisualizationViewer
Deprecated.
 
scaley - Variable in class edu.uci.ics.jung.visualization.Lens
Deprecated.
the scale of the BirdsEyeVisualizationViewer compared to the graph display
ScalingControl - Interface in edu.uci.ics.jung.visualization.control
 
ScalingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
ScalingGraphMouse applies a scaling transformation to the graph layout.
ScalingGraphMousePlugin(ScalingControl, int) - Constructor for class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
 
ScalingGraphMousePlugin(ScalingControl, int, float, float) - Constructor for class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
 
scalingPlugin - Variable in class edu.uci.ics.jung.visualization.control.AbstractModalGraphMouse
 
scalingPlugin - Variable in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
scalingPlugin - Variable in class edu.uci.ics.jung.visualization.ZoomPanGraphMouse
 
scratch.biao - package scratch.biao
 
scratch.danyel - package scratch.danyel
 
scratch.danyel.lazy - package scratch.danyel.lazy
 
scratch.danyel.sample - package scratch.danyel.sample
 
scratch.danyel.simplegraph - package scratch.danyel.simplegraph
 
scratch.danyel.triads - package scratch.danyel.triads
 
scratch.joshua.jung_2_0.core - package scratch.joshua.jung_2_0.core
 
scratch.joshua.jung_2_0.decoration - package scratch.joshua.jung_2_0.decoration
 
scratch.joshua.jung_2_0.utils - package scratch.joshua.jung_2_0.utils
 
scratch.joshua.ranking - package scratch.joshua.ranking
 
scratch.scott - package scratch.scott
 
scratch.scott.demo - package scratch.scott.demo
 
scratch.scott.event - package scratch.scott.event
 
scratch.scott.optimization - package scratch.scott.optimization
Provides a set of general optimization algorithms that can be used towards network problems.
scratch.scott.partition - package scratch.scott.partition
 
scratch.scott.registry - package scratch.scott.registry
 
scratch.scott.sample - package scratch.scott.sample
 
scratch.tom.simpleGraph - package scratch.tom.simpleGraph
 
screenDevice - Variable in class edu.uci.ics.jung.visualization.PluggableRenderer
the JComponent that this Renderer will display the graph on
screenSize - Variable in class samples.preview_new_graphdraw.AbstractLayout
 
screenSize - Variable in class samples.preview_new_graphdraw.EmittedLayout
 
scrollBarsMayControlAdjusting - Variable in class edu.uci.ics.jung.visualization.GraphZoomScrollPane
 
SEED - Static variable in class edu.uci.ics.jung.random.generators.BarabasiAlbertGenerator
Tags the initial "seed" vertices that the graph starts with
self_loop - Static variable in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
 
self_loop - Static variable in class edu.uci.ics.jung.visualization.PluggableRenderer
 
SelfLoopEdgePredicate - Class in edu.uci.ics.jung.graph.predicates
A predicate that checks to see whether a specified edge is a self-loop.
SelfLoopEdgePredicate() - Constructor for class edu.uci.ics.jung.graph.predicates.SelfLoopEdgePredicate
 
SerialFilter - Class in edu.uci.ics.jung.graph.filters
This is a generic filter that takes at least two other filters and runs them seially.
SerialFilter(Filter, Filter) - Constructor for class edu.uci.ics.jung.graph.filters.SerialFilter
Small constructor for two filters.
SerialFilter(List) - Constructor for class edu.uci.ics.jung.graph.filters.SerialFilter
Constructor for an arbitrary list of filters.
SerialFilter() - Constructor for class edu.uci.ics.jung.graph.filters.SerialFilter
Creates an empty list of filters.
set(Vertex, Map, int) - Method in class edu.uci.ics.jung.algorithms.cluster.BicomponentClusterer
A convenience method for setting an integer value for v in Map m.
setAcceptThoseAboveThreshhold(boolean) - Method in class edu.uci.ics.jung.graph.filters.impl.AlphabeticVertexFilter
Sets the acceptThoseAboveThreshhold: if true, this accepts values over the threshhold; if false, this accepts values up to and including the threshhold, but not above it.
setAdjustForGravity(boolean) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayout
Enable or disable gravity point adjusting.
setAdjustForGravity(boolean) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayoutInt
Enable or disable gravity point adjusting.
setAdjustForGravity(boolean) - Method in class samples.preview_new_graphdraw.iterablelayouts.KKLayout
Enable or disable gravity point adjusting.
setAngle(double) - Method in class edu.uci.ics.jung.visualization.contrib.CircleLayout.CircleVertexData
 
setArrowPlacementTolerance(float) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Specifies the smallest (squared) distance that an arrowhead must be moved in order for the placement code to decide that it's "close enough".
setArrowPlacementTolerance(float) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setAsList(boolean) - Method in class edu.uci.ics.jung.io.BipartiteGraphReader
 
setAspectRatioFunction(VertexAspectRatioFunction) - Method in class edu.uci.ics.jung.graph.decorators.AbstractVertexShapeFunction
 
setAspectRatioFunction(VertexAspectRatioFunction) - Method in interface edu.uci.ics.jung.graph.decorators.SettableVertexShapeFunction
 
setAttractionMultiplier(double) - Method in class edu.uci.ics.jung.visualization.FRLayout
 
setBackground(Color) - Method in class edu.uci.ics.jung.visualization.contrib.BirdsEyeGraphDraw
Deprecated.
 
setBackground(Color) - Method in class edu.uci.ics.jung.visualization.DefaultGraphLabelRenderer
Overrides JComponent.setBackground to assign the unselected-background color to the specified color.
setBackground(Color) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
 
setBackground(Color) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setBackground(Color) - Method in class scratch.scott.PSGr
Gets the current color.
setClicked(Vertex) - Method in class scratch.danyel.BPVR
 
setClickedEdge(Vertex) - Method in class scratch.danyel.BPVR
 
setClickPolicy(GraphLayoutPanelMouseListener.ClickPolicy) - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanel
 
setClip(int, int, int, int) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setClip(Shape) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setClip(Shape) - Method in class scratch.scott.PSGr
MGH added setClip (Shape s) hacked over Rectangle.
setClip(int, int, int, int) - Method in class scratch.scott.PSGr
MGH added setClip (x y w h) per 1.1 API, this is supposed to be **NEW** Clip, rather than intersection with existing Clip, but that may not be correct yet..
setClusteringExponent(double) - Method in class edu.uci.ics.jung.random.generators.KleinbergSmallWorldGenerator
 
setColor(Color) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setColor(Color) - Method in class scratch.scott.PSGr
Sets the current color to the specified color.
setColorKey(String) - Method in class scratch.scott.BasicRenderer
 
setComparator(Comparator) - Method in class edu.uci.ics.jung.utils.CollectionFactory.CollectionData
 
setComparator(Collection, Comparator) - Static method in class edu.uci.ics.jung.utils.CollectionFactory
 
setComposite(Composite) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setControlOffsetIncrement(float) - Method in class edu.uci.ics.jung.graph.decorators.AbstractEdgeShapeFunction
Sets the value of control_offset_increment.
setCopyAction(UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.algorithms.transformation.FoldingTransformer
Specifies the copy action used to attach data to edges.
setCopyAction(UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.graph.decorators.UserDatumNumberEdgeValue
 
setCopyAction(UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.graph.decorators.UserDatumNumberVertexValue
 
setCorner(JComponent) - Method in class edu.uci.ics.jung.visualization.GraphZoomScrollPane
 
setCreateDirectedOnly(boolean) - Method in class edu.uci.ics.jung.io.PajekNetFile
Deprecated.
Forces a graph that is normally undirected to be loaded in as its directed equivalent
setCrossover(double) - Method in class edu.uci.ics.jung.visualization.control.CrossoverScalingControl
Sets the crossover point to the specified value.
setCurrentRankScore(Element, double) - Method in class edu.uci.ics.jung.algorithms.importance.KStepMarkov
 
setCursor(Cursor) - Method in class edu.uci.ics.jung.visualization.control.AbstractGraphMousePlugin
 
setDecorationKey(String) - Method in class edu.uci.ics.jung.graph.filters.impl.NumericDecorationFilter
 
setDefaultDecorator(Decorator) - Method in class scratch.scott.registry.RegistryDecoratorSet
 
setDelegate(VertexShapeFunction) - Method in class edu.uci.ics.jung.graph.decorators.VertexIconAndShapeFunction
 
setDelegate(Layout) - Method in class edu.uci.ics.jung.visualization.LayoutDecorator
setter for the delegate
setDelegate(MutableTransformer) - Method in class edu.uci.ics.jung.visualization.transform.MutableTransformerDecorator
 
setDelegate(Graphics2D) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setDelegate(PluggableRenderer) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setDesiredPrecision(double) - Method in class edu.uci.ics.jung.algorithms.IterativeProcess
Defines the desired precision.
setDimensions(Dimension) - Method in class samples.preview_new_graphdraw.AbstractLayout
 
setDirected(boolean) - Method in class edu.uci.ics.jung.io.BipartiteGraphReader
 
setDisconnectedDistanceMultiplier(double) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayout
Sets a multiplicative factor that specifies the fraction of the graph's diameter to be used as the inter-vertex distance between disconnected vertices.
setDisp(double, double) - Method in class edu.uci.ics.jung.visualization.FRLayout.FRVertexData
 
setDisp(double, double) - Method in class edu.uci.ics.jung.visualization.ISOMLayout.ISOMVertexData
 
setDoubleBuffered(boolean) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
set whether this class uses its offscreen image or not.
setDoubleValue(double) - Method in class edu.uci.ics.jung.utils.MutableDouble
Sets the double value to a new value.
setDynamic(boolean) - Method in class edu.uci.ics.jung.utils.CollectionFactory.CollectionData
 
setDynamic(Collection, boolean) - Static method in class edu.uci.ics.jung.utils.CollectionFactory
If dynamic is true, the collection c backing the Iterator is automatically rebuilt-sorted and/or re-filtered each time getIterator(c) is called.
setEdgeArrowFunction(EdgeArrowFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the EdgeArrowFunction that specifies the Shape of the arrowheads for each edge.
setEdgeArrowFunction(EdgeArrowFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeArrowPredicate(Predicate) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the EdgeArrowPredicate that specifies whether arrowheads should be drawn for each edge.
setEdgeArrowPredicate(Predicate) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeColor(Color) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setEdgeColor(Color) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
 
setEdgeColorFunction(EdgeColorFunction) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setEdgeColorFunction(EdgeColorFunction) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Edges are drawn by calling EdgeColorFunction with the edge, to decide how it is to be drawn.
setEdgeColorFunction(EdgeColorFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Deprecated.
Use setEdgePaintFunction instead
setEdgeColorFunction(EdgeColorFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeFontFunction(EdgeFontFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the EdgeFontFunction that specifies the font to use for drawing each edge label.
setEdgeFontFunction(EdgeFontFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeIncludePredicate(Predicate) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the Predicate that specifies whether each edge should be drawn; only those edges for which this predicate returns true will be drawn.
setEdgeIncludePredicate(Predicate) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeKeys(String[]) - Method in class edu.uci.ics.jung.io.PajekNetFile
Deprecated.
set the edge the algorithm will use to store the edge weights
setEdgeLabelClosenessFunction(NumberEdgeValue) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the NumberEdgeValue that specifies where to draw the label for each edge.
setEdgeLabelClosenessFunction(NumberEdgeValue) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgePaintFunction(EdgePaintFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
 
setEdgePaintFunction(EdgePaintFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeShapeFunction(EdgeShapeFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
setter for the EdgeShapeFunction
setEdgeShapeFunction(EdgeShapeFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeStringer(EdgeStringer) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the EdgeStringer that specifies the label to draw for each edge.
setEdgeStringer(EdgeStringer) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeStrokeFunction(EdgeStrokeFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the EdgeStrokeFunction that specifies the Stroke to use when drawing each edge.
setEdgeStrokeFunction(EdgeStrokeFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setEdgeThickness(int) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setEdgeThickness(int) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Forces all edges to draw with this thickness.
setEdgeThicknessFunction(EdgeThicknessFunction) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setEdgeThicknessFunction(EdgeThicknessFunction) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
This version takes a function that dynamically chooses an edge thickness.
setEdgeWeight(Edge, double) - Method in class edu.uci.ics.jung.algorithms.importance.AbstractRanker
 
setEditingMode() - Method in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
setEllipse(Ellipse2D) - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer
 
setEnabled(boolean) - Method in class samples.graph.VertexImageShaperDemo.VertexStringerImpl
 
setEnabled(boolean) - Method in class scratch.biao.SliderPanel
 
setExchangeVertices(boolean) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayout
Enable or disable the local minimum escape technique by exchanging vertices.
setExchangeVertices(boolean) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayoutInt
Enable or disable the local minimum escape technique by exchanging vertices.
setExchangeVertices(boolean) - Method in class samples.preview_new_graphdraw.iterablelayouts.KKLayout
Enable or disable the local minimum escape technique by exchanging vertices.
setFillImages(boolean) - Method in class samples.graph.VertexImageShaperDemo.DemoVertexImageShapeFunction
 
setFont(Font) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setFont(Font) - Method in class scratch.scott.PSGr
Sets the font for all subsequent text-drawing operations.
setForceMultiplier(double) - Method in class edu.uci.ics.jung.visualization.SpringLayout
Sets the force multiplier for this instance.
setForeground(Color) - Method in class edu.uci.ics.jung.visualization.DefaultGraphLabelRenderer
Overrides JComponent.setForeground to assign the unselected-foreground color to the specified color.
setFrame(VisualizationViewer) - Method in class edu.uci.ics.jung.visualization.Lens
Deprecated.
 
setGetLocations(boolean) - Method in class edu.uci.ics.jung.io.PajekNetReader
Sets or clears the get_locations boolean.
setGraph(HypergraphBPG) - Method in class edu.uci.ics.jung.graph.impl.AbstractHyperUnitBPG
Deprecated.
 
setGraphLabelRenderer(GraphLabelRenderer) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
 
setGraphLabelRenderer(GraphLabelRenderer) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setGraphLayout(Layout) - Method in class edu.uci.ics.jung.visualization.BirdsEyeVisualizationViewer
Deprecated.
setter for layout
setGraphLayout(Layout) - Method in class edu.uci.ics.jung.visualization.contrib.BirdsEyeGraphDraw
Deprecated.
Dynamically chooses a new GraphLayout.
setGraphLayout(Layout, Dimension) - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
Removes the current graph layout, and adds a new one.
setGraphLayout(Layout) - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
set the graph Layout and if it is not already initialized, initialize it to the default VisualizationViewer preferred size of 600x600
setGraphLayout(Layout) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Use getVisualizationViewer.setGraphLayout(l) instead.
setGraphLayout(Layout) - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
set the graph Layout
setGraphLayout(Layout, Dimension) - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
Sets the graph Layout and initialize the Layout size to the passed dimensions.
setGraphLayout(Layout) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Removes the current graph layout, and adds a new one.
setGraphLayout(Layout, boolean) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Removes the current graph layout, and adds a new one, optionally re-scaling the view to show the entire layout
setGraphMLFileHandler(GraphMLFileHandler) - Method in class edu.uci.ics.jung.io.GraphMLFile
Allows the user to provide his/her own subclassed GraphML file handerl
setGraphMouse(VisualizationViewer.GraphMouse) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
a setter for the GraphMouse.
setGrowthAllowed() - Method in class edu.uci.ics.jung.statistics.Histogram
Allows histogram contents to grow in order to contain all accumulated values.
setHasGraphLayout(HasGraphLayout) - Method in interface edu.uci.ics.jung.visualization.PickSupport
 
setHasGraphLayout(HasGraphLayout) - Method in class edu.uci.ics.jung.visualization.RadiusPickSupport
called by VisualizationViewer when this PickSupport impl is added to VisualizationViewer.
setHasGraphLayout(HasGraphLayout) - Method in class edu.uci.ics.jung.visualization.ShapePickSupport
called by a HasLayout impl (like VisualizationViewer) when this PickSupport impl is added to it.
setHasShapes(HasShapeFunctions) - Method in class edu.uci.ics.jung.visualization.ShapePickSupport
 
setHiddenList(List) - Method in class samples.graph.southern.BipartiteVertexRenderer
 
setHiddenList(List) - Method in class scratch.danyel.BPVR
 
SetHyperedge - Class in edu.uci.ics.jung.graph.impl
An implementation of Hyperedge that stores its collection of incident vertices internally as a Set.
SetHyperedge() - Constructor for class edu.uci.ics.jung.graph.impl.SetHyperedge
 
SetHypergraph - Class in edu.uci.ics.jung.graph.impl
A basic implementation of Hypergraph.
SetHypergraph() - Constructor for class edu.uci.ics.jung.graph.impl.SetHypergraph
 
SetHypervertex - Class in edu.uci.ics.jung.graph.impl
An implementation of Hypervertex that maintains independent Sets of incident edges and neighbors.
SetHypervertex() - Constructor for class edu.uci.ics.jung.graph.impl.SetHypervertex
 
setIconMap(Map) - Method in class edu.uci.ics.jung.graph.decorators.DefaultVertexIconFunction
Sets the icon storage to the specified Map.
setIn(float) - Method in class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
 
setInEdgeWeight(Edge, double) - Method in class edu.uci.ics.jung.algorithms.importance.HITSWithPriors
 
setInteger(int) - Method in class edu.uci.ics.jung.utils.MutableInteger
Sets the value of this object to newInteger.
setIntegerBinWidth() - Method in class edu.uci.ics.jung.statistics.Histogram
Forces the bin width of the histogram to be integer.
setIterationDelay(long) - Method in class samples.preview_new_graphdraw.iter.LayoutIterator
 
setLabel(Vertex, String) - Method in class edu.uci.ics.jung.graph.decorators.GlobalStringLabeller
Associates a Vertex with a Label, overrwriting any previous labels on this vertex or vertices equal to it.
setLabel(Vertex, String) - Method in class edu.uci.ics.jung.graph.decorators.StringLabeller
Associates a Vertex with a Label, overrwriting any previous labels on this vertex.
setLabel(Vertex, String) - Method in class edu.uci.ics.jung.graph.decorators.ToStringLabeller
This method always throws an IllegalArgument exception: you cannot externally set the setstring method.
setLabel(String) - Method in class samples.graph.BasicRenderer
 
setLabel(String) - Method in class scratch.scott.BasicRenderer
 
setLabellerTo(Graph, Object) - Static method in class edu.uci.ics.jung.graph.decorators.GlobalStringLabeller
Sets the StringLabeller of this graph, at this key, to be a ToStringLabeller.
setLabellerTo(Graph) - Static method in class edu.uci.ics.jung.graph.decorators.GlobalStringLabeller
Sets the default StringLabeller of this graph to be a ToStringLabeller.
setLabellerTo(Graph, Object) - Static method in class edu.uci.ics.jung.graph.decorators.ToStringLabeller
Sets the StringLabeller of this graph, at this key, to be a ToStringLabeller.
setLabellerTo(Graph) - Static method in class edu.uci.ics.jung.graph.decorators.ToStringLabeller
Sets the default StringLabeller of this graph to be a ToStringLabeller.
setLayout(Layout) - Method in interface edu.uci.ics.jung.visualization.GraphElementAccessor
Sets the Layout that is used to specify the locations of vertices and edges in this instance to layout.
setLayout(Layout) - Method in class edu.uci.ics.jung.visualization.RadiusGraphElementAccessor
 
setLayout(Layout) - Method in class edu.uci.ics.jung.visualization.ShapePickSupport
ShapePickSupport gets its layout from its VisualizationViewer, so this method currently does nothing.
setLayoutDisplay(EmittedLayout) - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanel
We maintain, in memory, two layouts.
setLayoutTransformer(MutableTransformer) - Method in class edu.uci.ics.jung.visualization.BirdsEyeVisualizationViewer
Deprecated.
 
setLayoutTransformer(LayoutTransformer) - Method in class edu.uci.ics.jung.visualization.ShapePickSupport
When this PickSupport is set on a VisualizationViewer, the VisualizationViewer calls this method to pass its layout transformer in
setLayoutTransformer(MutableTransformer) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setLengthFactor(double) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayout
Sets a multiplicative factor which partly specifies the "preferred" length of an edge (L).
setLensColor(Color) - Method in class edu.uci.ics.jung.visualization.control.PickingGraphMousePlugin
 
setLightDrawing(boolean) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Creates a SettableRenderer that will be drawn in the "light" style: a colored box next to text, instead of text overlaying the box.
setLocation(ArchetypeVertex, Point2D) - Method in class edu.uci.ics.jung.visualization.DefaultSettableVertexLocationFunction
 
setLocation(ArchetypeVertex, Point2D) - Method in interface edu.uci.ics.jung.visualization.SettableVertexLocationFunction
 
setLocked(boolean) - Method in class edu.uci.ics.jung.visualization.control.PickingGraphMousePlugin
 
setMagnification(float) - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer
 
setMaxBetweeness(double) - Method in class scratch.danyel.sample.FadeBetweennessRenderer
 
setMaxDistance(double) - Method in class edu.uci.ics.jung.algorithms.shortestpath.DijkstraDistance
Allows the user to specify the maximum distance that this instance will calculate.
setMaximumIterations(int) - Method in class edu.uci.ics.jung.algorithms.IterativeProcess
Defines the maximum allowed number of iterations.
setMaxIterations(int) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayout
 
setMaxIterations(int) - Method in class edu.uci.ics.jung.visualization.contrib.KKLayoutInt
 
setMaxIterations(int) - Method in class edu.uci.ics.jung.visualization.FRLayout
 
setMaxIterations(int) - Method in class scratch.scott.FastScalableMDS
 
setMaxSize(int) - Method in class edu.uci.ics.jung.graph.decorators.InterpolatingVertexSizeFunction
 
setMaxTargets(int) - Method in class edu.uci.ics.jung.algorithms.shortestpath.DijkstraDistance
Allows the user to specify the maximum number of target vertices per source vertex for which this instance will calculate distances.
setMinSize(int) - Method in class edu.uci.ics.jung.graph.decorators.InterpolatingVertexSizeFunction
 
setMode(ModalGraphMouse.Mode) - Method in class edu.uci.ics.jung.visualization.control.AbstractModalGraphMouse
setter for the Mode.
setMode(ModalGraphMouse.Mode) - Method in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
setter for the Mode.
setMode(ModalGraphMouse.Mode) - Method in interface edu.uci.ics.jung.visualization.control.ModalGraphMouse
 
setModel(VisualizationModel) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setModifiers(int) - Method in class edu.uci.ics.jung.visualization.control.AbstractGraphMousePlugin
setter for mouse modifiers
setModifiers(int) - Method in class edu.uci.ics.jung.visualization.control.GraphMouseAdapter
 
setModifiers(int) - Method in interface edu.uci.ics.jung.visualization.control.GraphMousePlugin
set the mouse event modifiers that will activate this plugin
setNeighborsToEdges(Map) - Method in class edu.uci.ics.jung.graph.impl.SimpleSparseVertex
Sets this vertex's internal successor -> out-edge map to the specified map succsToOutEdges.
setNeighborsToEdges(Map) - Method in class edu.uci.ics.jung.graph.impl.SimpleUndirectedSparseVertex
Sets this vertex's internal successor -> out-edge map to the specified map succsToOutEdges.
setNodeSizeScale(double) - Method in class samples.graph.BasicRenderer
 
setNodeSizeScale(double) - Method in class scratch.scott.BasicRenderer
 
setNormalizeRankings(boolean) - Method in class edu.uci.ics.jung.algorithms.importance.AbstractRanker
Allows the user to specify whether or not s/he wants the rankings to be normalized.
setNumber(ArchetypeEdge, Number) - Method in class edu.uci.ics.jung.graph.decorators.ConstantDirectionalEdgeValue
 
setNumber(ArchetypeEdge, Number) - Method in class edu.uci.ics.jung.graph.decorators.ConstantEdgeValue
 
setNumber(ArchetypeEdge, Number) - Method in class edu.uci.ics.jung.graph.decorators.EdgeWeightLabeller
 
setNumber(ArchetypeVertex, Number) - Method in class edu.uci.ics.jung.graph.decorators.MapNumberVertexValue
 
setNumber(ArchetypeEdge, Number) - Method in interface edu.uci.ics.jung.graph.decorators.NumberEdgeValue
 
setNumber(ArchetypeVertex, Number) - Method in interface edu.uci.ics.jung.graph.decorators.NumberVertexValue
 
setNumber(ArchetypeEdge, Number) - Method in class edu.uci.ics.jung.graph.decorators.UserDatumNumberEdgeValue
 
setNumber(ArchetypeVertex, Number) - Method in class edu.uci.ics.jung.graph.decorators.UserDatumNumberVertexValue
 
setNumber(ArchetypeEdge, ArchetypeVertex, Number) - Method in class scratch.joshua.ranking.AbstractIterativeRanker.UniformIncident
 
setNumber(ArchetypeEdge, Number) - Method in class scratch.joshua.ranking.AbstractIterativeRanker.UniformIncident
 
setNumber(ArchetypeEdge, Number) - Method in class scratch.joshua.ranking.AbstractIterativeRanker.UniformOut
 
setNumber(ArchetypeEdge, ArchetypeVertex, Number) - Method in interface scratch.joshua.ranking.EdgeVertexNumberFunction
 
setNumber(ArchetypeEdge, Number) - Method in class scratch.joshua.ranking.PageRankRanker.SourceNormalizedEdgeValue
 
setNumber(ArchetypeVertex, Number) - Method in class test.edu.uci.ics.jung.algorithms.importance.VoltageRankerTest.VertexVoltages
 
setNumberVertexValue(NumberVertexValue) - Method in class edu.uci.ics.jung.graph.decorators.InterpolatingVertexSizeFunction
 
setOffset(double, double) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Deprecated.
use setTranslate(double, offset, double offset)
setOut(float) - Method in class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
 
setOutlineImages(boolean) - Method in class samples.graph.VertexImageShaperDemo.DemoVertexImageShapeFunction
 
setPaint(Paint) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setPaintMode() - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setPaintMode() - Method in class scratch.scott.PSGr
Sets the default paint mode to overwrite the destination with the current color.
setParallel(boolean) - Method in class edu.uci.ics.jung.algorithms.transformation.FoldingTransformer
Specifies whether the folded graphs create parallel edges or a decorated single edge.
setParallel(boolean) - Method in class edu.uci.ics.jung.io.BipartiteGraphReader
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in class edu.uci.ics.jung.graph.decorators.EdgeShape.BentLine
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in class edu.uci.ics.jung.graph.decorators.EdgeShape.CubicCurve
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in class edu.uci.ics.jung.graph.decorators.EdgeShape.Loop
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in interface edu.uci.ics.jung.graph.decorators.EdgeShape.ParallelRendering
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in class edu.uci.ics.jung.graph.decorators.EdgeShape.QuadCurve
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
 
setParallelEdgeIndexFunction(ParallelEdgeIndexFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setPickedKey(PickedInfo) - Method in class edu.uci.ics.jung.visualization.AbstractRenderer
 
setPickedKey(PickedInfo) - Method in interface edu.uci.ics.jung.visualization.Renderer
Deprecated.
Use an independent PickedInfo instance.
setPickedKey(PickedInfo) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setPickedState(PickedState) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setPickingMode() - Method in class edu.uci.ics.jung.visualization.control.AbstractModalGraphMouse
 
setPickingMode() - Method in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
setPickSupport(PickSupport) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setPredicate(Predicate) - Method in class edu.uci.ics.jung.utils.CollectionFactory.CollectionData
 
setPredicate(Collection, Predicate) - Static method in class edu.uci.ics.jung.utils.CollectionFactory
 
setPredsToInEdges(Map) - Method in class edu.uci.ics.jung.graph.impl.SimpleDirectedSparseVertex
Sets this vertex's internal predecessor -> in-edge map to the specified map predsToInEdges.
setPredsToInEdges(Map) - Method in class edu.uci.ics.jung.graph.impl.SimpleSparseVertex
Sets this vertex's internal predecessor -> in-edge map to the specified map predsToInEdges.
setPriorRankScore(Vertex, double) - Method in class edu.uci.ics.jung.algorithms.importance.RelativeAuthorityRanker
Allows the user to specify a value to set for the prior rank score
setPriors(Set) - Method in class edu.uci.ics.jung.algorithms.importance.RelativeAuthorityRanker
Specifies which vertices are root nodes (priors).
setRadius(double) - Method in class edu.uci.ics.jung.visualization.contrib.CircleLayout
 
setRadius(double) - Method in class edu.uci.ics.jung.visualization.subLayout.CircularSubLayout
 
setRadius(double) - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer.PolarPoint
 
setRandomSeed(int) - Method in class edu.uci.ics.jung.algorithms.cluster.VoltageClusterer
 
setRankScore(Element, double) - Method in class edu.uci.ics.jung.algorithms.importance.AbstractRanker
 
setRankScore(Element, double, String) - Method in class edu.uci.ics.jung.algorithms.importance.HITS
 
setRankScore(Element, double) - Method in class edu.uci.ics.jung.algorithms.importance.HITS
 
setRankScore(Element, double, String) - Method in class edu.uci.ics.jung.algorithms.importance.HITSWithPriors
 
setRankScore(Element, double) - Method in class edu.uci.ics.jung.algorithms.importance.HITSWithPriors
 
setRankScore(Element, double) - Method in class edu.uci.ics.jung.algorithms.importance.MarkovCentrality
 
setRelaxerThreadSleepTime(long) - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
Sets the relaxerThreadSleepTime.
setRelaxerThreadSleepTime(long) - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
Sets the relaxerThreadSleepTime.
setRemoveRankScoresOnFinalize(boolean) - Method in class edu.uci.ics.jung.algorithms.importance.AbstractRanker
Instructs the ranker whether or not it should remove the rank scores from the nodes (or edges) once the ranks have been computed.
setRenderer(Renderer) - Method in class edu.uci.ics.jung.visualization.BirdsEyeVisualizationViewer
Deprecated.
UNTESTED.
setRenderer(Renderer) - Method in class edu.uci.ics.jung.visualization.contrib.BirdsEyeGraphDraw
Deprecated.
A method to set the renderer.
setRenderer(Renderer) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Use getVisualizationViewer().setRenderer(r) instead.
setRenderer(Renderer) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Sets the showing Renderer to be the input Renderer.
setRendererPane(CellRendererPane) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
 
setRendererPane(CellRendererPane) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setRenderingHint(RenderingHints.Key, Object) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setRenderingHints(Map) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setRenderingHints(Map) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setRepulsionMultiplier(double) - Method in class edu.uci.ics.jung.visualization.FRLayout
 
setRepulsionRange(int) - Method in class edu.uci.ics.jung.visualization.SpringLayout
Sets the node repulsion range (in drawing area units) for this instance.
setRoot(Graph) - Static method in class edu.uci.ics.jung.visualization.contrib.DAGLayout
setRoot calculates the level of each vertex in the graph.
setRoot(Vertex) - Static method in class edu.uci.ics.jung.visualization.contrib.DAGLayout
Set vertex v to be level 0.
setRootVertex(Vertex) - Method in class edu.uci.ics.jung.visualization.contrib.TreeLayout
 
setRotateEdgeLabels(boolean) - Method in class edu.uci.ics.jung.visualization.DefaultGraphLabelRenderer
 
setRotateEdgeLabels(boolean) - Method in interface edu.uci.ics.jung.visualization.GraphLabelRenderer
 
setScale(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.transform.MutableAffineTransformer
setter for the scale fires a PropertyChangeEvent with the AffineTransforms representing the previous and new values for scale and offset
setScale(double, double, Point2D) - Method in interface edu.uci.ics.jung.visualization.transform.MutableTransformer
 
setScale(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.transform.MutableTransformerDecorator
 
setScale(double, double) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Deprecated.
access via getViewTransformer method
setScale(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Deprecated.
access via getViewTransformer method
setScaler(ScalingControl) - Method in class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
 
setScreenDevice(JComponent) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
The screen device is the JComponent on which the renderer will display the graph.
setScreenDevice(JComponent) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setScrollBarValues(Rectangle, Point2D, Point2D, Point2D, Point2D) - Method in class edu.uci.ics.jung.visualization.GraphZoomScrollPane
 
setSeed(int) - Method in class edu.uci.ics.jung.algorithms.cluster.KMeansClusterer
 
setSeed(long) - Method in class edu.uci.ics.jung.random.generators.EppsteinPowerLawGenerator
 
setSeed(long) - Method in class edu.uci.ics.jung.random.generators.ErdosRenyiGenerator
 
setSeed(long) - Method in class edu.uci.ics.jung.random.generators.SimpleRandomGenerator
 
setShapeImages(boolean) - Method in class samples.graph.VertexImageShaperDemo.DemoVertexImageShapeFunction
 
setShouldDrawDirectedArrows(boolean) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Sets whether the system should draw arrows on directed edges.
setShouldDrawSelfLoops(boolean) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Sets whether the system should draw self-loops.
setShouldDrawUndirectedArrows(boolean) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Sets whether the system should draw arrows on directed edges.
setSizeFunction(VertexSizeFunction) - Method in class edu.uci.ics.jung.graph.decorators.AbstractVertexShapeFunction
 
setSizeFunction(VertexSizeFunction) - Method in interface edu.uci.ics.jung.graph.decorators.SettableVertexShapeFunction
 
setSizeKey(String) - Method in class samples.graph.BasicRenderer
 
setSizeKey(String) - Method in class scratch.scott.BasicRenderer
 
setStretch(double) - Method in class edu.uci.ics.jung.visualization.SpringLayout
Sets the stretch parameter for this instance.
setStringLabeller(StringLabeller) - Method in class edu.uci.ics.jung.graph.filters.impl.AlphabeticVertexFilter
Sets the stringLabeller.
setStringLabeller(StringLabeller) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
 
setStringLabeller(StringLabeller) - Method in class scratch.danyel.QuickDrawRenderer
 
setStroke(Stroke) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setSuccsToOutEdges(Map) - Method in class edu.uci.ics.jung.graph.impl.SimpleDirectedSparseVertex
Sets this vertex's internal successor -> out-edge map to the specified map succsToOutEdges.
setSuccsToOutEdges(Map) - Method in class edu.uci.ics.jung.graph.impl.SimpleSparseVertex
Sets this vertex's internal successor -> out-edge map to the specified map succsToOutEdges.
SettableBidiDecoration<K,V> - Interface in scratch.joshua.jung_2_0.decoration
An interface for readable and writeable one-to-one decorations of arbitrary elements.
SettableDecoration<K,V> - Interface in scratch.joshua.jung_2_0.decoration
An interface for readable and writeable decorations of arbitrary elements.
SettableRenderer - Class in edu.uci.ics.jung.visualization.graphdraw
Deprecated.
Replaced by PluggableRenderer.
SettableRenderer() - Constructor for class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
This variant simply renders vertices as small empty boxes without labels.
SettableRenderer(StringLabeller) - Constructor for class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Creates a SettableRenderer that will be drawn in the "heavy" style: a box around the label
SettableRenderer(StringLabeller, EdgeStringer) - Constructor for class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Creates a SettableRenderer that will label edges with the given EdgeStringer.
SettableVertexLocationFunction - Interface in edu.uci.ics.jung.visualization
An extension of VertexLocationFunction that provides a means to alter the location for a ArchetypeVertex.
SettableVertexMapper - Interface in edu.uci.ics.jung.utils
An interface for user-mutable VertexMappers.
SettableVertexShapeFunction - Interface in edu.uci.ics.jung.graph.decorators
 
setTextCallback(StatusCallback) - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
 
setTextCallback(StatusCallback) - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
set a callback to be called during the relaxer iteration
setTextCallback(StatusCallback) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
convenience pass-thru to model
setTheta(double) - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer.PolarPoint
 
setThreshhold(String) - Method in class edu.uci.ics.jung.graph.filters.impl.AlphabeticVertexFilter
Sets the threshhold.
setThreshold(double) - Method in class edu.uci.ics.jung.graph.filters.impl.NumericDecorationFilter
 
setToIdentity() - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer
 
setToIdentity() - Method in class edu.uci.ics.jung.visualization.transform.MutableAffineTransformer
 
setToIdentity() - Method in interface edu.uci.ics.jung.visualization.transform.MutableTransformer
 
setToIdentity() - Method in class edu.uci.ics.jung.visualization.transform.MutableTransformerDecorator
 
setToolTipFunction(ToolTipFunction) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setToolTipListener(VisualizationViewer.ToolTipListener) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
sets the tooltip listener to the user's defined implementation of ToolTipListener
setTransform(AffineTransform) - Method in class edu.uci.ics.jung.visualization.transform.AffineTransformer
 
setTransform(AffineTransform) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setTransformer(Transformer) - Method in class edu.uci.ics.jung.visualization.transform.shape.TransformingGraphics
 
setTransformer(Transformer) - Method in class edu.uci.ics.jung.visualization.transform.shape.TransformingPluggableRenderer
 
setTransformingMode() - Method in class edu.uci.ics.jung.visualization.control.AbstractModalGraphMouse
 
setTransformingMode() - Method in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
setTranslate(double, double) - Method in class edu.uci.ics.jung.visualization.transform.MutableAffineTransformer
replace the Transform's translate x and y values with the passed values, leaving the scale values unchanged
setTranslate(double, double) - Method in interface edu.uci.ics.jung.visualization.transform.MutableTransformer
 
setTranslate(double, double) - Method in class edu.uci.ics.jung.visualization.transform.MutableTransformerDecorator
 
setTranslate(double, double) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
Deprecated.
access via getViewTransformer method
setUniqueLabels(boolean) - Method in class edu.uci.ics.jung.io.PajekNetReader
Sets or clears the unique_labels boolean.
setUp() - Method in class edu.uci.ics.jung.algorithms.importance.RandomWalkSTBetweenness
 
setUp() - Method in class scratch.scott.optimization.TestSimulatedAnnealer
 
setUp() - Method in class scratch.scott.registry.TestVertexRegistry
 
setUp() - Method in class scratch.scott.TestBrandesBetweennessCentrality
 
setUp() - Method in class scratch.scott.TestGraphCollapser
 
setUp() - Method in class scratch.scott.TestNewmanBetweennessCentrality
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.blockmodel.TestBipartiteEquivalent
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.blockmodel.TestGraphCollapser
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.cluster.KMeansTest
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.cluster.TestBicomponentClusterer
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.cluster.TestClusterSet
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.cluster.TestEdgeBetweennessClusterer
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.cluster.TestExactFlowCommunity
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.cluster.TestWeakComponentClusterer
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.connectivity.TestBFSDistanceLabeler
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.connectivity.TestKNeighborhoodExtractor
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.flows.TestEdmondsKarpMaxFlow
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.GraphMatrixOperationsTest
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestBetweennessCentrality
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestDegreeDistributionRanker
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestHITS
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestHITSWithPriors
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestKStepMarkov
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestMarkovCentrality
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestPageRank
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestPageRankWithPriors
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestRandomWalkBetweenness
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.TestWeightedNIPaths
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.importance.VoltageRankerTest
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.shortestpath.TestShortestPath
 
setUp() - Method in class test.edu.uci.ics.jung.algorithms.transformations.KPartiteTaggerTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.bipartite.TestHyperVertex
 
setUp() - Method in class test.edu.uci.ics.jung.graph.decorators.TestGlobalStringLabeller
 
setUp() - Method in class test.edu.uci.ics.jung.graph.decorators.TestIndexer
 
setUp() - Method in class test.edu.uci.ics.jung.graph.decorators.TestLabeller
 
setUp() - Method in class test.edu.uci.ics.jung.graph.decorators.TestMultiLabeller
 
setUp() - Method in class test.edu.uci.ics.jung.graph.decorators.TestNumericDecorator
 
setUp(boolean) - Method in class test.edu.uci.ics.jung.graph.filters.FilterTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.filters.FilterTest2
 
setUp() - Method in class test.edu.uci.ics.jung.graph.filters.NewFilterTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.impl.BasicGraphTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.impl.CopyGraphTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.impl.KPartiteTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.impl.VertexTypeTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.impl.VertexTypeTest2
 
setUp() - Method in class test.edu.uci.ics.jung.graph.predicates.EdgePredicateTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.predicates.GraphPredicateTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.predicates.PredicateUtilTest
 
setUp() - Method in class test.edu.uci.ics.jung.graph.predicates.VertexPredicateTest
 
setUp() - Method in class test.edu.uci.ics.jung.io.PajekNetFileTest
 
setUp() - Method in class test.edu.uci.ics.jung.io.TestGraphMLFile
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestBarabasiAlbert
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestBetaSmallWorldGenerator
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestEppsteinPowerLawGenerator
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestErdosRenyi
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestKleinbergSmallWorldGenerator
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestLattice1DGenerator
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestLattice2DGenerator
 
setUp() - Method in class test.edu.uci.ics.jung.random.generators.TestSimpleRandom
 
setUp() - Method in class test.edu.uci.ics.jung.random.permuters.TestBernoulliEdgePermuter
 
setUp() - Method in class test.edu.uci.ics.jung.statistics.TestDegreeDistributions
 
setUp() - Method in class test.edu.uci.ics.jung.statistics.TestGraphStatistics
 
setUp() - Method in class test.edu.uci.ics.jung.utils.CoordinateUtilsTest
 
setUp() - Method in class test.edu.uci.ics.jung.utils.MapBinaryHeapTest
 
setUp() - Method in class test.edu.uci.ics.jung.utils.UserDataTest
 
setUp1() - Method in class test.edu.uci.ics.jung.graph.impl.RemovalGraphTest
 
setUpUndir() - Method in class test.edu.uci.ics.jung.graph.impl.RemovalGraphTest
 
setUseAuthorityForRanking(boolean) - Method in class edu.uci.ics.jung.algorithms.importance.HITS
If evaluate() has not already been called, the user can override the type of importance.
setUseAuthorityForRanking(boolean) - Method in class edu.uci.ics.jung.algorithms.importance.HITSWithPriors
If evaluate() has not already been called, the user can override the type of importance.
setUserDataFactory(UserDataFactory) - Static method in class edu.uci.ics.jung.utils.UserDataDelegate
 
setUserDatum(Object, Object, UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.graph.impl.AbstractHyperUnitBPG
Deprecated.
 
setUserDatum(Object, Object, UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.graph.impl.HypergraphBPG
Deprecated.
 
setUserDatum(Object, Object, UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.utils.DefaultUserData
Changes the user-level information to the object.
setUserDatum(Object, Object, UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.utils.UnifiedUserData
Changes the user-level information to the object.
setUserDatum(Object, Object, UserDataContainer.CopyAction) - Method in interface edu.uci.ics.jung.utils.UserDataContainer
If key refers to an existing user datum in this object's repository, that datum is replaced by the specified datum.
setUserDatum(Object, Object, UserDataContainer.CopyAction) - Method in class edu.uci.ics.jung.utils.UserDataDelegate
 
setUserDefinedEdgeWeightKey(String) - Method in class edu.uci.ics.jung.algorithms.importance.AbstractRanker
Allows the user to provide his own set of data instances as edge weights by giving the ranker the UserDatum key where those instances can be found.
setValue(Number, UserDataContainer) - Method in class edu.uci.ics.jung.graph.decorators.NumericDecorator
Sets the value for a given graph/vertex/edge
setValue(int) - Method in class edu.uci.ics.jung.graph.filters.impl.WeightedEdgeGraphFilter
 
setValue(int) - Method in interface edu.uci.ics.jung.graph.filters.LevelFilter
 
setValue(Object) - Method in class edu.uci.ics.jung.visualization.DefaultGraphLabelRenderer
Sets the String object for the cell being rendered to value.
setVerboseMode(boolean) - Method in class edu.uci.ics.jung.io.HypergraphReader
 
setVertexBGColor(Color) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Manually sets the color of an unpicked Vertex's background (i.e. its field).
setVertexBGColor(Color) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setVertexColorFunction(VertexColorFunction) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Finds the color of a vertex with a VertexColorFunction.
setVertexColorFunction(VertexColorFunction) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setVertexColorFunction(VertexColorFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Deprecated.
Use setVertexPaintFunction with a VertexPaintFunction if you can
setVertexColorFunction(VertexColorFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexFontFunction(VertexFontFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the VertexFontFunction that specifies the font to use for drawing each vertex label.
setVertexFontFunction(VertexFontFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexForegroundColor(Color) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Manually sets the color of a Vertex's foreground (i.e. its text).
setVertexForegroundColor(Color) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setVertexIconFunction(VertexIconFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
 
setVertexIconFunction(VertexIconFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexIncludePredicate(Predicate) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the Predicate that specifies whether each vertex should be drawn; only those vertices for which this predicate returns true will be drawn.
setVertexIncludePredicate(Predicate) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexLabelCentering(boolean) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Specifies whether vertex labels are drawn centered on the vertex position (true) or offset to one side (false).
setVertexLabelCentering(boolean) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexLocations(SettableVertexLocationFunction) - Method in class edu.uci.ics.jung.visualization.control.EditingGraphMousePlugin
sets the vertex locations.
setVertexLocations(SettableVertexLocationFunction) - Method in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
setVertexPaintFunction(VertexPaintFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the VertexPaintFunction which specifies the draw (border and text) and fill (interior) Paint for each vertex.
setVertexPaintFunction(VertexPaintFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexPickedColor(Color) - Method in class edu.uci.ics.jung.visualization.graphdraw.SettableRenderer
Deprecated.
Manually sets the color of a picked Vertex's background (i.e. its field).
setVertexPickedColor(Color) - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Modify this property via the renderer instead.
setVertexShapeFunction(VertexShapeFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the VertexShapeFunction, which specifies the Shape for each vertex.
setVertexShapeFunction(VertexShapeFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexStringer(VertexStringer) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the VertexStringer that specifies the label to draw for each vertex.
setVertexStringer(VertexStringer) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setVertexStrokeFunction(VertexStrokeFunction) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
Sets the VertexStrokeFunction which specifies the Stroke to use when drawing each vertex border.
setVertexStrokeFunction(VertexStrokeFunction) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setViewCenter(Point2D) - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer
 
setViewRadius(double) - Method in class edu.uci.ics.jung.visualization.transform.LensTransformer
 
setViewTransformer(MutableTransformer) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
 
setViewTransformer(MutableTransformer) - Method in class edu.uci.ics.jung.visualization.transform.shape.PluggableRendererDecorator
 
setViewTransformer(MutableTransformer) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setVisible(boolean) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
 
setWeight(ArchetypeEdge, int) - Method in class edu.uci.ics.jung.graph.decorators.EdgeWeightLabeller
Sets an edge to this weight.
setX(double) - Method in class edu.uci.ics.jung.visualization.Coordinates
Sets the x value to be d;
setX(double) - Method in class samples.preview_new_graphdraw.Coordinates
Sets the x value to be d;
setXORMode(Color) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
setXORMode(Color) - Method in class scratch.scott.PSGr
Sets the paint mode to alternate between the current color and the new specified color.
setY(double) - Method in class edu.uci.ics.jung.visualization.Coordinates
Sets the y value to be d;
setY(double) - Method in class samples.preview_new_graphdraw.Coordinates
Sets the y value to be d;
setZoomAtMouse(boolean) - Method in class edu.uci.ics.jung.visualization.control.AbstractModalGraphMouse
 
setZoomAtMouse(boolean) - Method in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
setZoomAtMouse(boolean) - Method in class edu.uci.ics.jung.visualization.control.ScalingGraphMousePlugin
 
setZoomAtMouse(boolean) - Method in class edu.uci.ics.jung.visualization.ZoomPanGraphMouse
 
shapeMap - Variable in class edu.uci.ics.jung.graph.decorators.VertexIconAndShapeFunction
 
ShapePickSupport - Class in edu.uci.ics.jung.visualization
ShapePickSupport provides access to Vertices and Edges based on their actual shapes.
ShapePickSupport(HasGraphLayout, LayoutTransformer, HasShapeFunctions, float) - Constructor for class edu.uci.ics.jung.visualization.ShapePickSupport
Create an instance.
ShapePickSupport(float) - Constructor for class edu.uci.ics.jung.visualization.ShapePickSupport
 
ShapePickSupport() - Constructor for class edu.uci.ics.jung.visualization.ShapePickSupport
Create an instance.
ShapeTransformer - Interface in edu.uci.ics.jung.visualization.transform.shape
Provides methods to map points from one coordinate system to another: graph to screen and screen to graph.
SHARED - Static variable in class edu.uci.ics.jung.utils.UserData
A CopyAction that links UserData--that is, points to the original data.
shear(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.transform.MutableAffineTransformer
shears the transform by passed parameters
shear(double, double, Point2D) - Method in interface edu.uci.ics.jung.visualization.transform.MutableTransformer
 
shear(double, double, Point2D) - Method in class edu.uci.ics.jung.visualization.transform.MutableTransformerDecorator
 
shear(double, double) - Method in class edu.uci.ics.jung.visualization.transform.shape.GraphicsDecorator
 
ShearingGraphMousePlugin - Class in edu.uci.ics.jung.visualization.control
ShearingGraphMousePlugin allows the user to drag with the mouse to shear the transform either in the horizontal or vertical direction.
ShearingGraphMousePlugin() - Constructor for class edu.uci.ics.jung.visualization.control.ShearingGraphMousePlugin
create an instance with default modifier values
ShearingGraphMousePlugin(int) - Constructor for class edu.uci.ics.jung.visualization.control.ShearingGraphMousePlugin
create an instance with passed modifier values
shearingPlugin - Variable in class edu.uci.ics.jung.visualization.control.AbstractModalGraphMouse
 
shearingPlugin - Variable in class edu.uci.ics.jung.visualization.control.EditingModalGraphMouse
 
ShortestPath - Interface in edu.uci.ics.jung.algorithms.shortestpath
 
ShortestPathDemo - Class in samples.graph
 
ShortestPathDemo(Graph) - Constructor for class samples.graph.ShortestPathDemo
 
ShortestPathDemo.MyEdgePaintFunction - Class in samples.graph
 
ShortestPathDemo.MyEdgePaintFunction() - Constructor for class samples.graph.ShortestPathDemo.MyEdgePaintFunction
 
ShortestPathDemo.MyEdgeStrokeFunction - Class in samples.graph
 
ShortestPathDemo.MyEdgeStrokeFunction() - Constructor for class samples.graph.ShortestPathDemo.MyEdgeStrokeFunction
 
ShortestPathDemo.MyVertexPaintFunction - Class in samples.graph
 
ShortestPathDemo.MyVertexPaintFunction() - Constructor for class samples.graph.ShortestPathDemo.MyVertexPaintFunction
 
ShortestPathDemoDriver - Class in samples.graph
 
ShortestPathDemoDriver() - Constructor for class samples.graph.ShortestPathDemoDriver
 
ShortestPathUtils - Class in edu.uci.ics.jung.algorithms.shortestpath
 
ShortestPathUtils() - Constructor for class edu.uci.ics.jung.algorithms.shortestpath.ShortestPathUtils
 
shouldAddEdge(Vertex, Set, Collection) - Method in class edu.uci.ics.jung.algorithms.blockmodel.GraphCollapser
Overridable method checks whether an edge representing the given set of edges should be created.
shouldCheckEdgeDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.BothEdgeAndVertexPolicy
 
shouldCheckEdgeDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.EdgeAndVertexPolicy
 
shouldCheckEdgeDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.EdgeEventPolicy
 
shouldCheckEdgeDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.NoEventPolicy
 
shouldCheckEdgeDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.VertexEventPolicy
 
shouldCheckVertexDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.BothEdgeAndVertexPolicy
 
shouldCheckVertexDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.EdgeAndVertexPolicy
 
shouldCheckVertexDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.EdgeEventPolicy
 
shouldCheckVertexDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.NoEventPolicy
 
shouldCheckVertexDistance() - Method in class samples.preview_new_graphdraw.impl.GraphLayoutPanelMouseListener.VertexEventPolicy
 
shouldCount(Indexer, Vertex, Vertex, Vertex) - Static method in class edu.uci.ics.jung.algorithms.metrics.TriadicCensus
Make sure we have a canonical ordering: Returns true if u < w, or v < w < u and v doesn't link to w
shouldCount(Indexer, Vertex, Vertex, Vertex) - Static method in class scratch.danyel.triads.TriadicCensus
Make sure we have a canonical ordering: Returns true if u < w, or v < w < u and v doesn't link to w
show_arrow - Variable in class samples.graph.PluggableRendererDemo
 
show_edge - Variable in class samples.graph.PluggableRendererDemo
 
show_vertex - Variable in class samples.graph.PluggableRendererDemo
 
showGrid(VisualizationViewer, boolean) - Method in class samples.graph.SatelliteViewDemo
 
ShowLayouts - Class in samples.graph
A demonstrator for some of the graph layout algorithms.
ShowLayouts() - Constructor for class samples.graph.ShowLayouts
 
ShowLayouts.GraphChooser - Class in samples.graph
 
ShowLayouts.GraphChooser(JComboBox) - Constructor for class samples.graph.ShowLayouts.GraphChooser
 
showpage() - Method in class scratch.scott.PSGr
Needed unless the file is intended as part of a larger one.
showStatus() - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Shows the status bar at bottom left
similarColors - Variable in class samples.graph.ClusteringDemo
 
similarColors - Static variable in class scratch.scott.sample.Demo
 
simple - Variable in class edu.uci.ics.jung.utils.TypedVertexGenerator
if true, generated vertices won't support parallel edges
SIMPLE_EDGE - Static variable in interface edu.uci.ics.jung.graph.Graph
 
SimpleAbstractSparseGraph<V,E> - Class in scratch.joshua.jung_2_0.core
 
SimpleAbstractSparseGraph() - Constructor for class scratch.joshua.jung_2_0.core.SimpleAbstractSparseGraph
 
SimpleDirectedSparseGraph<V,E extends DirectedEdge> - Class in scratch.joshua.jung_2_0.core
 
SimpleDirectedSparseGraph() - Constructor for class scratch.joshua.jung_2_0.core.SimpleDirectedSparseGraph
 
SimpleDirectedSparseVertex - Class in edu.uci.ics.jung.graph.impl
An implementation of Vertex that resides in a directed graph; none of its adjoining edges may be parallel.
SimpleDirectedSparseVertex() - Constructor for class edu.uci.ics.jung.graph.impl.SimpleDirectedSparseVertex
Creates a new instance of a vertex for inclusion in a sparse directed graph.
SimpleEdgePredicate - Class in edu.uci.ics.jung.graph.predicates
A predicate that tests to see whether a specified edge is "simple" (neither parallel to any edge nor a self-loop).
SimpleEdgePredicate() - Constructor for class edu.uci.ics.jung.graph.predicates.SimpleEdgePredicate
 
SimpleEdgeRenderer - Class in samples.preview_new_graphdraw.impl
 
SimpleEdgeRenderer() - Constructor for class samples.preview_new_graphdraw.impl.SimpleEdgeRenderer
 
SimpleEdgeRenderer(Color) - Constructor for class samples.preview_new_graphdraw.impl.SimpleEdgeRenderer
 
SimpleGraph - Class in scratch.danyel.simplegraph
 
SimpleGraph() - Constructor for class scratch.danyel.simplegraph.SimpleGraph
 
SimpleGraphDraw - Class in samples.graph
Illustrates the simplest possible drawing program.
SimpleGraphDraw() - Constructor for class samples.graph.SimpleGraphDraw
 
SimpleGraphMouse - Class in edu.uci.ics.jung.visualization
SimpleGraphMouse is the original GraphMouse class that was nested in VisualizationViewer and installed as a listener for mouse events and mouse motion events.
SimpleGraphMouse(VisualizationViewer) - Constructor for class edu.uci.ics.jung.visualization.SimpleGraphMouse
create an instance for the passed VisualizationViewer
SimpleGraphUtils - Class in scratch.danyel.simplegraph
 
SimpleGraphUtils() - Constructor for class scratch.danyel.simplegraph.SimpleGraphUtils
 
SimpleLayoutAlgorithm - Class in samples.preview_new_graphdraw.staticlayouts
 
SimpleLayoutAlgorithm() - Constructor for class samples.preview_new_graphdraw.staticlayouts.SimpleLayoutAlgorithm
 
simpleLoop - Static variable in class edu.uci.ics.jung.graph.decorators.EdgeShape
a convenience instance for other edge shapes to use for self-loop edges where parallel instances overlay each other
SimpleRandomGenerator - Class in edu.uci.ics.jung.random.generators
Simple graph generator where |V| vertices are generated and |E| random edges chosen pairwise uniformly
SimpleRandomGenerator(int, int) - Constructor for class edu.uci.ics.jung.random.generators.SimpleRandomGenerator
Constructs the generator
SimpleRenderer - Class in scratch.danyel.sample
 
SimpleRenderer(StringLabeller) - Constructor for class scratch.danyel.sample.SimpleRenderer
 
SimpleSparseVertex - Class in edu.uci.ics.jung.graph.impl
An implementation of Vertex that resides in a sparse graph which may contain both directed and undirected edges.
SimpleSparseVertex() - Constructor for class edu.uci.ics.jung.graph.impl.SimpleSparseVertex
Creates a new instance of a vertex for inclusion in a sparse graph.
SimpleUndirectedSparseGraph<V,E> - Class in scratch.joshua.jung_2_0.core
 
SimpleUndirectedSparseGraph() - Constructor for class scratch.joshua.jung_2_0.core.SimpleUndirectedSparseGraph
 
SimpleUndirectedSparseVertex - Class in edu.uci.ics.jung.graph.impl
An implementation of Vertex that resides in a undirected graph; none of its adjoining edges may be parallel.
SimpleUndirectedSparseVertex() - Constructor for class edu.uci.ics.jung.graph.impl.SimpleUndirectedSparseVertex
 
SimpleVertexRenderer - Class in samples.preview_new_graphdraw.impl
 
SimpleVertexRenderer() - Constructor for class samples.preview_new_graphdraw.impl.SimpleVertexRenderer
 
SimulatedAnnealer - Class in scratch.scott.optimization
A general implementation of simulated annealing.
SimulatedAnnealer(Configuration, double, double, double, double, double, int) - Constructor for class scratch.scott.optimization.SimulatedAnnealer
 
singleSourceShortestPath(ArchetypeVertex, Set, int) - Method in class edu.uci.ics.jung.algorithms.shortestpath.DijkstraDistance
Implements Dijkstra's single-source shortest-path algorithm for weighted graphs.
SingleValueRanker - Class in scratch.joshua.ranking
 
SingleValueRanker(ArchetypeGraph, int, double) - Constructor for class scratch.joshua.ranking.SingleValueRanker
 
SingleValueRanker(ArchetypeGraph, NumberVertexValue, int, double) - Constructor for class scratch.joshua.ranking.SingleValueRanker
 
SingleValueRanker(ArchetypeGraph, NumberEdgeValue, int, double) - Constructor for class scratch.joshua.ranking.SingleValueRanker
 
SingleValueRanker(ArchetypeGraph, NumberVertexValue, NumberEdgeValue, int, double) - Constructor for class scratch.joshua.ranking.SingleValueRanker
 
SinkVertexPredicate - Class in edu.uci.ics.jung.graph.predicates
Evaluates to true if and only if the specified vertex is a sink, i.e., has no outgoing directed edges.
SinkVertexPredicate() - Constructor for class edu.uci.ics.jung.graph.predicates.SinkVertexPredicate
 
size() - Method in class edu.uci.ics.jung.algorithms.cluster.ClusterSet
the size of the cluster collection.
size() - Method in class edu.uci.ics.jung.statistics.Histogram
Returns the number of points in the series.
size() - Method in class edu.uci.ics.jung.utils.MapBinaryHeap
Returns the size of this heap.
size() - Method in class scratch.danyel.simplegraph.SimpleGraph
Returns the number of Vertices
size() - Method in class scratch.joshua.jung_2_0.decoration.TestMap
 
size() - Method in class scratch.scott.partition.AbstractPartitionClass
 
size_diff - Variable in class edu.uci.ics.jung.graph.decorators.InterpolatingVertexSizeFunction
 
skewness() - Method in class edu.uci.ics.jung.statistics.Histogram
Returns the skewness of the values accumulated in the histogram bins.
skewness() - Method in class edu.uci.ics.jung.statistics.StatisticalMoments
 
skip(BufferedReader, Predicate) - Method in class edu.uci.ics.jung.io.PajekNetReader
Returns the first line read from br for which p returns true, or null if there is no such line.
sl_d - Variable in class edu.uci.ics.jung.utils.StringLabellerVertexMapper
 
sl_s - Variable in class edu.uci.ics.jung.utils.StringLabellerVertexMapper
 
SLEEK - Static variable in class edu.uci.ics.jung.visualization.contrib.Arrow
 
SliderPanel - Class in scratch.biao
 
SliderPanel(String) - Constructor for class scratch.biao.SliderPanel
 
SliderPanel(String, int, int, int) - Constructor for class scratch.biao.SliderPanel
 
sliders - Variable in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
 
SlightMarginTransformer - Class in samples.preview_new_graphdraw.transform
This resizer ensures that there's a little space at the margins.
SlightMarginTransformer() - Constructor for class samples.preview_new_graphdraw.transform.SlightMarginTransformer
Creates an instance of a slight margin transformer.
SlightMarginTransformer(double) - Constructor for class samples.preview_new_graphdraw.transform.SlightMarginTransformer
Creates an instance of a slight margin transformer with the given percentage.
smallNumber() - Static method in class edu.uci.ics.jung.utils.NumericalPrecision
Returns the smallest number that the system can handle.
sort() - Method in class edu.uci.ics.jung.algorithms.cluster.ClusterSet
Sorts the clusters by size.
sourceMap - Variable in class edu.uci.ics.jung.algorithms.shortestpath.DijkstraDistance
 
SourceVertexPredicate - Class in edu.uci.ics.jung.graph.predicates
Evaluates to true if and only if the specified vertex is a source, i.e., has no incoming directed edges.
SourceVertexPredicate() - Constructor for class edu.uci.ics.jung.graph.predicates.SourceVertexPredicate
 
south - Variable in class edu.uci.ics.jung.visualization.GraphZoomScrollPane
 
SouthernWomenApplet - Class in samples.graph.southern
 
SouthernWomenApplet() - Constructor for class samples.graph.southern.SouthernWomenApplet
 
SPARSE_ROOT_KEY - Static variable in class edu.uci.ics.jung.graph.impl.SparseTree
 
SparseGraph - Class in edu.uci.ics.jung.graph.impl
An implementation of AbstractSparseGraph that, by default, imposes no constraints on the edges and vertices that may be added to it.
SparseGraph() - Constructor for class edu.uci.ics.jung.graph.impl.SparseGraph
 
SparseGraph(Collection) - Constructor for class edu.uci.ics.jung.graph.impl.SparseGraph
Creates a new SparseGraph and adds the specified edge constraints.
SparseTree - Class in edu.uci.ics.jung.graph.impl
An implementation of Graph that consists of a Vertex set and a DirectedEdge set.
SparseTree(Vertex) - Constructor for class edu.uci.ics.jung.graph.impl.SparseTree
 
SparseVertex - Class in edu.uci.ics.jung.graph.impl
An implementation of Vertex that resides in a sparse graph which may contain directed and/or undirected edges, as well as parallel edges.
SparseVertex() - Constructor for class edu.uci.ics.jung.graph.impl.SparseVertex
Creates a new instance of a vertex for inclusion in a sparse graph.
SPRING_KEY - Static variable in class scratch.scott.AestheticSpringVisualizer
 
SpringLayout - Class in edu.uci.ics.jung.visualization
The SpringLayout package represents a visualization of a set of nodes.
SpringLayout(Graph) - Constructor for class edu.uci.ics.jung.visualization.SpringLayout
Constructor for a SpringLayout for a raw graph with associated dimension--the input knows how big the graph is.
SpringLayout(Graph, SpringLayout.LengthFunction) - Constructor for class edu.uci.ics.jung.visualization.SpringLayout
Constructor for a SpringLayout for a raw graph with associated component.
SpringLayout - Class in samples.preview_new_graphdraw.iterablelayouts
The SpringLayout package represents a visualization of a set of nodes.
SpringLayout() - Constructor for class samples.preview_new_graphdraw.iterablelayouts.SpringLayout
 
SpringLayout.LengthFunction - Interface in edu.uci.ics.jung.visualization
If the edge is weighted, then override this method to show what the visualized length is.
SpringLayout.SpringDimensionChecker - Class in edu.uci.ics.jung.visualization
 
SpringLayout.SpringDimensionChecker() - Constructor for class edu.uci.ics.jung.visualization.SpringLayout.SpringDimensionChecker
 
SpringLayout.SpringEdge - Class in samples.preview_new_graphdraw.iterablelayouts
 
SpringLayout.SpringEdge(Edge, VisVertex, VisVertex) - Constructor for class samples.preview_new_graphdraw.iterablelayouts.SpringLayout.SpringEdge
 
SpringLayout.SpringEdgeData - Class in edu.uci.ics.jung.visualization
 
SpringLayout.SpringEdgeData(Edge) - Constructor for class edu.uci.ics.jung.visualization.SpringLayout.SpringEdgeData
 
SpringLayout.SpringVertex - Class in samples.preview_new_graphdraw.iterablelayouts
 
SpringLayout.SpringVertex(Vertex, double, double) - Constructor for class samples.preview_new_graphdraw.iterablelayouts.SpringLayout.SpringVertex
 
SpringLayout.SpringVertexData - Class in edu.uci.ics.jung.visualization
 
SpringLayout.SpringVertexData() - Constructor for class edu.uci.ics.jung.visualization.SpringLayout.SpringVertexData
 
SpringLayout.UnitLengthFunction - Class in edu.uci.ics.jung.visualization
Returns all edges as the same length: the input value
SpringLayout.UnitLengthFunction(int) - Constructor for class edu.uci.ics.jung.visualization.SpringLayout.UnitLengthFunction
 
square(Graph, MatrixElementOperations) - Static method in class edu.uci.ics.jung.algorithms.GraphMatrixOperations
Returns the graph that corresponds to the square of the (weighted) adjacency matrix that the specified graph g encodes.
squaredError(double[], double[]) - Static method in class edu.uci.ics.jung.statistics.DiscreteDistribution
Returns the squared difference between the two specified distributions, which must have the same number of elements.
squareDistanceLineToPoint(Coordinates, Coordinates, double, double) - Static method in class samples.preview_new_graphdraw.CoordinateUtil
Calculates the square of the distance from a segment running (x1, y1) to (x2, y2) to a point (x,y)
stack - Variable in class edu.uci.ics.jung.algorithms.cluster.BicomponentClusterer
 
standardDeviation() - Method in class edu.uci.ics.jung.statistics.Histogram
Returns the standard deviation of the values accumulated in the histogram bins.
standardDeviation() - Method in class edu.uci.ics.jung.statistics.StatisticalMoments
Returns the standard deviation.
start() - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
If the visualization runner is not yet running, kick it off.
start() - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
start the relaxer
start() - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
convenience pass-thru to the model
start() - Method in class samples.graph.AddNodeDemo
 
start() - Method in class samples.graph.ClusteringDemo
 
start() - Method in class samples.graph.PluggableRendererDemo
 
start() - Method in class samples.graph.RankingDemoDriver
 
start() - Method in class samples.graph.ShortestPathDemoDriver
 
start() - Method in class samples.graph.ShowLayouts
 
start() - Method in class samples.graph.southern.SouthernWomenApplet
 
start() - Method in class samples.preview_new_graphdraw.impl.crooked.CrookedRun
 
start() - Method in class samples.preview_new_graphdraw.iter.LocalGraphDraw
 
start - Variable in class samples.preview_new_graphdraw.iterablelayouts.InterpolatingIterableLayout
 
start - Variable in class samples.preview_new_graphdraw.iterablelayouts.WrappedIterableLayout
 
start() - Method in class scratch.scott.GraphGeneratorDemo
 
start() - Method in class scratch.scott.sample.Demo
 
startElement(String, String, String, Attributes) - Method in class edu.uci.ics.jung.io.GraphMLFileHandler
 
startFunction() - Method in class samples.graph.PluggableRendererDemo
 
startingLayout - Variable in class samples.preview_new_graphdraw.staticlayouts.IterableToStaticLayout
 
startIterations() - Method in class samples.preview_new_graphdraw.iter.LayoutIterator
 
stateChanged(ChangeEvent) - Method in class edu.uci.ics.jung.visualization.GraphDraw.SliderChangeListener
Deprecated.
 
stateChanged(ChangeEvent) - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
In response to changes from the model, repaint the view, then fire an event to any listeners.
stateChanged(ChangeEvent) - Method in class scratch.biao.SliderPanel
Listen to the slider.
staticAnimation - Variable in class samples.preview_new_graphdraw.iter.LocalGraphDraw
 
StaticGraphDraw - Class in samples.preview_new_graphdraw.impl
 
StaticGraphDraw() - Constructor for class samples.preview_new_graphdraw.impl.StaticGraphDraw
 
StaticGraphDraw - Class in samples.preview_new_graphdraw.test
 
StaticGraphDraw() - Constructor for class samples.preview_new_graphdraw.test.StaticGraphDraw
 
StaticLayout - Class in edu.uci.ics.jung.visualization
 
StaticLayout(Graph) - Constructor for class edu.uci.ics.jung.visualization.StaticLayout
 
StaticLayout - Class in samples.preview_new_graphdraw
 
StaticLayout() - Constructor for class samples.preview_new_graphdraw.StaticLayout
 
StatisticalMoments - Class in edu.uci.ics.jung.statistics
A data structure representing the central moments of a distribution including: the mean the variance the skewness the kurtosis
Data values that are observed are passed into this data structure via the accumulate(...) method and the corresponding central moments are updated on each call
StatisticalMoments() - Constructor for class edu.uci.ics.jung.statistics.StatisticalMoments
Default constructor methods: declare space for 5 moments.
StatisticalMoments(int) - Constructor for class edu.uci.ics.jung.statistics.StatisticalMoments
General constructor methods.
STATUS_COMPLETE - Static variable in class scratch.danyel.lazy.LazySparseVertex
 
STATUS_NAME_KNOWN_BUT_EMPTY - Static variable in class scratch.danyel.lazy.LazySparseVertex
 
STATUS_READ_BUT_NOT_NEIGHBORS - Static variable in class scratch.danyel.lazy.LazySparseVertex
 
statusbar - Variable in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
 
statusCallback - Variable in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
a callback called during relaxer iteration
StatusCallback - Interface in edu.uci.ics.jung.visualization
This thin interface is used to allow the GraphDraw and _VisualizationViewer systems to get status reports from Layouts.
stop() - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
set a flag to stop the VisRunner relaxer thread
stop() - Method in class edu.uci.ics.jung.visualization.GraphDraw
Deprecated.
Use getVisualizationViewer().stop() instead.
stop() - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
Request that the relaxer be stopped.
stop() - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
convenience pass-thru to model
stop - Variable in class samples.preview_new_graphdraw.iter.LayoutIterator
 
stop() - Method in class samples.preview_new_graphdraw.iter.LocalGraphDraw
 
stop() - Method in class scratch.danyel.TMAMiniGraph
 
stop() - Method in class scratch.scott.sample.Demo
 
stopIterations() - Method in class samples.preview_new_graphdraw.iter.LayoutIterator
 
stretch - Variable in class edu.uci.ics.jung.visualization.SpringLayout
 
STRETCH - Static variable in class samples.preview_new_graphdraw.iterablelayouts.SpringLayout
 
STRETCH - Static variable in class scratch.scott.AestheticSpringVisualizer
 
StringInputStream - Class in edu.uci.ics.jung.utils
Deprecated.
As of JUNG version 1.5.2. Use java.io.StringReader instead.
StringInputStream(String) - Constructor for class edu.uci.ics.jung.utils.StringInputStream
Deprecated.
Composes a stream from a String
StringLabeller - Class in edu.uci.ics.jung.graph.decorators
A StringLabeller applies a set of labels to a Graph.
StringLabeller(Graph) - Constructor for class edu.uci.ics.jung.graph.decorators.StringLabeller
 
StringLabeller.UniqueLabelException - Exception in edu.uci.ics.jung.graph.decorators
A minor class to store exceptions from duplicate labels in the Graph.
StringLabeller.UniqueLabelException(String) - Constructor for exception edu.uci.ics.jung.graph.decorators.StringLabeller.UniqueLabelException
 
StringLabellerVertexMapper - Class in edu.uci.ics.jung.utils
Maps one vertex to another based on their common label in specified StringLabeller instances.
StringLabellerVertexMapper(ArchetypeGraph) - Constructor for class edu.uci.ics.jung.utils.StringLabellerVertexMapper
 
StringLabellerVertexMapper(StringLabeller, StringLabeller) - Constructor for class edu.uci.ics.jung.utils.StringLabellerVertexMapper
 
stroke - Variable in class edu.uci.ics.jung.graph.decorators.ConstantEdgeStrokeFunction
 
stroke - Variable in class edu.uci.ics.jung.graph.decorators.ConstantVertexStrokeFunction
 
StructuralHoles - Class in edu.uci.ics.jung.algorithms.metrics
Calculates some of the measures from Burt's text "Structural Holes: The Social Structure of Competition".
StructuralHoles(NumberEdgeValue) - Constructor for class edu.uci.ics.jung.algorithms.metrics.StructuralHoles
Creates a StructuralHoles instance based on the edge weights specified by nev.
StructurallyEquivalent - Class in edu.uci.ics.jung.algorithms.blockmodel
Checks a graph for sets of structurally equivalent vertices: vertices that share all the same edges.
StructurallyEquivalent() - Constructor for class edu.uci.ics.jung.algorithms.blockmodel.StructurallyEquivalent
 
StructurallyEquivalentII - Class in edu.uci.ics.jung.algorithms.blockmodel
Checks a graph for sets of structurally equivalent vertices: vertices that share all the same edges.
StructurallyEquivalentII() - Constructor for class edu.uci.ics.jung.algorithms.blockmodel.StructurallyEquivalentII
 
strunc(double) - Method in class scratch.scott.PSGr
 
SubclassGraphTest - Class in test.edu.uci.ics.jung.graph.impl
 
SubclassGraphTest() - Constructor for class test.edu.uci.ics.jung.graph.impl.SubclassGraphTest
 
subdivide(Line2D, Line2D, Line2D) - Method in class edu.uci.ics.jung.visualization.PluggableRenderer
divide a Line2D into 2 new Line2Ds that are returned in the passed left and right instances, if non-null
SubLayout - Interface in edu.uci.ics.jung.visualization.subLayout
A special purpose helper for a Layout, that will provide locations foe Vertices.
SubLayoutDecorator - Class in edu.uci.ics.jung.visualization.subLayout
Extends the base decorator class and overrides methods to cause the location methods to check with the sublayouts for location information
SubLayoutDecorator(Layout) - Constructor for class edu.uci.ics.jung.visualization.subLayout.SubLayoutDecorator
 
SubLayoutDemo - Class in samples.graph
Demonstrates the Cluster, CircularCluster, and ClusteringLayout classes.
SubLayoutDemo() - Constructor for class samples.graph.SubLayoutDemo
create an instance of a simple graph with controls to demo the zoomand hyperbolic features.
subLayouts - Variable in class edu.uci.ics.jung.visualization.subLayout.SubLayoutDecorator
 
SUBSET_MANAGER - Static variable in interface edu.uci.ics.jung.graph.ArchetypeGraph
 
SubsetManager - Class in edu.uci.ics.jung.utils
A class which allows users to create and maintain Predicate-specified vertex and edge subsets.
SubsetManager(ArchetypeGraph) - Constructor for class edu.uci.ics.jung.utils.SubsetManager
Creates a SubsetManager, adds it to the specified graph's user data repository, and adds itself as a listener to the graph's vertex and edge addition and removal events, so that the subsets' memberships can be maintained.
subtract(double) - Method in class edu.uci.ics.jung.utils.MutableDouble
Decreases the double's value by value.
subtract(double) - Method in class edu.uci.ics.jung.utils.MutableInteger
Increases the int's value by value.
suite() - Static method in class scratch.scott.registry.TestVertexRegistry
 
suite() - Static method in class scratch.scott.TestBrandesBetweennessCentrality
 
suite() - Static method in class scratch.scott.TestGraphCollapser
 
suite() - Static method in class scratch.scott.TestNewmanBetweennessCentrality
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.cluster.TestBicomponentClusterer
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.cluster.TestClusterSet
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.cluster.TestEdgeBetweennessClusterer
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.cluster.TestExactFlowCommunity
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.cluster.TestWeakComponentClusterer
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.connectivity.TestBFSDistanceLabeler
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.connectivity.TestKNeighborhoodExtractor
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.flows.TestEdmondsKarpMaxFlow
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestBetweennessCentrality
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestDegreeDistributionRanker
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestHITS
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestHITSWithPriors
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestKStepMarkov
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestMarkovCentrality
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestPageRank
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestPageRankWithPriors
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestRandomWalkBetweenness
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.importance.TestWeightedNIPaths
 
suite() - Static method in class test.edu.uci.ics.jung.algorithms.shortestpath.TestUnweightedShortestPath
 
suite() - Static method in class test.edu.uci.ics.jung.graph.decorators.TestNumericDecorator
 
suite() - Static method in class test.edu.uci.ics.jung.graph.filters.FilterTest
 
suite() - Static method in class test.edu.uci.ics.jung.graph.filters.FilterTest2
 
suite() - Static method in class test.edu.uci.ics.jung.graph.impl.BasicGraphTest
 
suite() - Static method in class test.edu.uci.ics.jung.graph.impl.CopyGraphTest
 
suite() - Static method in class test.edu.uci.ics.jung.graph.impl.FailingGraphTest
 
suite() - Static method in class test.edu.uci.ics.jung.graph.impl.RemovalGraphTest
 
suite() - Static method in class test.edu.uci.ics.jung.graph.impl.VertexTypeTest2
 
suite() - Static method in class test.edu.uci.ics.jung.io.PajekNetFileTest
 
suite() - Static method in class test.edu.uci.ics.jung.io.TestGraphMLFile
 
suite() - Static method in class test.edu.uci.ics.jung.io.TestMatrixFile
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestBarabasiAlbert
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestBetaSmallWorldGenerator
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestEppsteinPowerLawGenerator
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestErdosRenyi
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestKleinbergSmallWorldGenerator
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestLattice1DGenerator
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestLattice2DGenerator
 
suite() - Static method in class test.edu.uci.ics.jung.random.generators.TestSimpleRandom
 
suite() - Static method in class test.edu.uci.ics.jung.random.permuters.TestBernoulliEdgePermuter
 
suite() - Static method in class test.edu.uci.ics.jung.statistics.TestDegreeDistributions
 
suite() - Static method in class test.edu.uci.ics.jung.statistics.TestGraphStatistics
 
suite() - Static method in class test.edu.uci.ics.jung.utils.TestGraphUtils
 
suite() - Static method in class test.edu.uci.ics.jung.visualization.TestFRLayout
 
suite() - Static method in class test.edu.uci.ics.jung.visualization.TestSpringLayout
 
support - Variable in class edu.uci.ics.jung.visualization.Lens
Deprecated.
support for property changes
supportsDirected - Variable in class test.edu.uci.ics.jung.graph.impl.VertexTypeTest2
 
supportsInvert() - Method in class samples.preview_new_graphdraw.transform.CrookedLineTransformer
This method allows inversion, by doing nothing.
supportsInvert() - Method in class samples.preview_new_graphdraw.transform.FitOnScreenTransformer
 
supportsInvert() - Method in interface samples.preview_new_graphdraw.transform.LayoutTransformer
Most functions should support invert.
supportsInvert() - Method in class samples.preview_new_graphdraw.transform.PipelineResizingTransformer
 
supportsInvert() - Method in class samples.preview_new_graphdraw.transform.SlightMarginTransformer
 
suspend() - Method in class edu.uci.ics.jung.visualization.DefaultVisualizationModel
set a flag to suspend the relaxer thread
suspend() - Method in interface edu.uci.ics.jung.visualization.VisualizationModel
suspend the relaxer
suspend() - Method in class edu.uci.ics.jung.visualization.VisualizationViewer
convenience pass-thru to the model
switchLayout - Variable in class samples.graph.AddNodeDemo
 
symmetricKL(double[], double[]) - Static method in class edu.uci.ics.jung.statistics.DiscreteDistribution
Returns KullbackLeibler(dist, reference) + KullbackLeibler(reference, dist).
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