Package Bio :: Package Emboss :: Module Applications :: Class ENeighborCommandline
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Class ENeighborCommandline

source code

                     object --+            
                              |            
Application.AbstractCommandline --+        
                                  |        
          _EmbossMinimalCommandLine --+    
                                      |    
                     _EmbossCommandLine --+
                                          |
                                         ENeighborCommandline

Commandline object for the eneighbor program from EMBOSS (DEPRECATED).

This is an EMBOSS wrapper around neighbor from PHYLIP.

It has been replaced by "fneighbor", see FNeighborCommandline.

Instance Methods [hide private]
 
__init__(self, cmd='eneighbor', **kwargs)
Create a new instance of a command line wrapper object.
source code

Inherited from _EmbossCommandLine (private): _validate

Inherited from Application.AbstractCommandline: __call__, __repr__, __setattr__, __str__, set_parameter

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __sizeof__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, cmd='eneighbor', **kwargs)
(Constructor)

source code 

Create a new instance of a command line wrapper object.

Overrides: object.__init__
(inherited documentation)