Package Bio :: Package Affy :: Module CelFile :: Class CelScanner
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Class CelScanner

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Scanner for Affymetrix CEL files (DEPRECATED)

Methods: feed Feed data into the scanner.

The scanner generates (and calls the consumer) the following types of events:

Rows - the number of rows on the microarray Cols - the number of columns on the microarray StartIntensity - generated when the section [INTENSITY] is found ReadIntensity - one line in the section [INTENSITY]

This class is DEPRECATED; please use the read() function in this module.

Instance Methods [hide private]
 
__init__(self) source code
 
feed(scanner, handle, consumer)
Feed in a handle to a Cel file for scanning.
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Method Details [hide private]

feed(scanner, handle, consumer)

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Feed in a handle to a Cel file for scanning. handle is a file-like object that contains the Cel file. consumer is a Consumer object that will receive events as the report is scanned.