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InsdcScanner --+ | EmblScanner --+ | _ImgtScanner
For extracting chunks of information in IMGT (EMBL like) files (PRIVATE).
IMGT files are like EMBL files but in order to allow longer feature types the features should be indented by 25 characters not 21 characters. In practice the IMGT flat files tend to use either 21 or 25 characters, so we must cope with both.
This is private to encourage use of Bio.SeqIO rather than Bio.GenBank.
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Inherited from Inherited from Inherited from Inherited from |
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FEATURE_START_MARKERS =
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Return list of tuples for the features (if present) Each feature is returned as a tuple (key, location, qualifiers) where key and location are strings (e.g. "CDS" and "complement(join(490883..490885,1..879))") while qualifiers is a list of two string tuples (feature qualifier keys and values). Assumes you have already read to the start of the features table.
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FEATURE_START_MARKERS
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