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PrimarySequenceSet< TSequence > Member List

This is the complete list of members for PrimarySequenceSet< TSequence >, including all inherited members.

_array_seqPrimarySequenceSet< TSequence > [protected]
_length_maxPrimarySequenceSet< TSequence > [protected]
_nb_seqPrimarySequenceSet< TSequence > [protected]
_nmodalPrimarySequenceSet< TSequence > [protected]
_total_lengthPrimarySequenceSet< TSequence > [protected]
_translPrimarySequenceSet< TSequence > [protected]
get_sequence(int i) const PrimarySequenceSet< TSequence > [inline]
get_translator() const PrimarySequenceSet< TSequence > [inline]
operator()(int i) const PrimarySequenceSet< TSequence > [inline]
PrimarySequenceSet()PrimarySequenceSet< TSequence > [inline]
tell_alphabet_size() const PrimarySequenceSet< TSequence > [inline]
tell_file_name(int i) const PrimarySequenceSet< TSequence > [inline]
tell_length() const PrimarySequenceSet< TSequence > [inline, virtual]
tell_length_max() const PrimarySequenceSet< TSequence > [inline]
tell_length_seq(int i) const PrimarySequenceSet< TSequence > [inline]
tell_nb_inv() const PrimarySequenceSet< TSequence > [inline]
tell_nb_sequence() const PrimarySequenceSet< TSequence > [inline]
tell_seq_name(int i) const PrimarySequenceSet< TSequence > [inline]
weight_matrix(double **wmat) const PrimarySequenceSet< TSequence > [inline]
~PrimarySequenceSet()PrimarySequenceSet< TSequence > [inline, virtual]



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