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const.h

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00001 /* seqpp/const.h
00002  *
00003  * Copyright (C) 2003 Laboratoire Statistique & Génome
00004  *
00005  * This program is free software; you can redistribute it and/or modify
00006  * it under the terms of the GNU General Public License as published by
00007  * the Free Software Foundation; either ersion 2 of the License, or (at
00008  * your option) any later version.
00009  *
00010  * This program is distributed in the hope that it will be useful, but
00011  * WITHOUT ANY WARRANTY; without even the implied warranty of
00012  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
00013  * General Public License for more details.
00014  *
00015  * You should have received a copy of the GNU General Public License
00016  * along with this program; if not, write to the Free Software
00017  * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
00018  */
00019 
00028 #ifndef SEQPP_CONST_H
00029 #define SEQPP_CONST_H
00030 
00034 namespace seqplusplus_space{
00036 const int BUFFERSEQ = 100;
00037 
00039 const int LGBLOC=1000;
00040 
00042 const char SKIPCHAR='>';
00043 
00045 const char INVCHAR='?';
00047 const char COMCHAR='#';
00049 const char LABPATT[3]="->";
00051 const char LABINV[4]="INV";
00052 
00054 const int  LGSTRING=256;
00056 const int LG_FILENAME=200;
00058 const int STREAM_PRECISION=8;
00060 const double PRECISION=1e-7;
00061 
00063 const double EPS=1e-5;
00064 const int NBSEED=100;
00065 const int NBITERMAX=100;
00066 
00068 const short DEBUG=0;
00069 }
00070 namespace s_s = seqplusplus_space;
00071 #endif



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