Package Bio :: Package expressions :: Module fasta
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Module Bio.expressions.fasta

Function Summary
  make_1id(s, dbname, name)
  make_2id(s, dbname, primary_name, secondary_name)

Variable Summary
MaxRepeat comment_lines = <Martel.Expression.MaxRepeat instance at...
HeaderFooter format = <Martel.Expression.HeaderFooter instance at 0xb...
Group generic_term = <Martel.Expression.Group instance at 0xb7...
Seq gnl_id = <Martel.Expression.Seq instance at 0xb78a4a2c>
Alt id_term = <Martel.Expression.Alt instance at 0xb78a4eac>
list ids = [<Martel.Expression.Seq instance at 0xb789db0c>, <...
Seq ncbi_term = <Martel.Expression.Seq instance at 0xb78a4da...
Group ncbi_word = <Martel.Expression.Group instance at 0xb78a4...
Group record = <Martel.Expression.Group instance at 0xb78a338c...
Seq seqline = <Martel.Expression.Seq instance at 0xb78a320c>
Seq seqline_nonewline = <Martel.Expression.Seq instance at 0...
Group sequence = <Martel.Expression.Group instance at 0xb78a33...
Seq title = <Martel.Expression.Seq instance at 0xb78a310c>

Variable Details

comment_lines

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0xb78a4f6c>                   

format

Type:
HeaderFooter
Value:
<Martel.Expression.HeaderFooter instance at 0xb78a340c>                

generic_term

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb78a4e6c>                       

gnl_id

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb78a4a2c>                         

id_term

Type:
Alt
Value:
<Martel.Expression.Alt instance at 0xb78a4eac>                         

ids

Type:
list
Value:
[<Martel.Expression.Seq instance at 0xb789db0c>,
 <Martel.Expression.Seq instance at 0xb789dcac>,
 <Martel.Expression.Seq instance at 0xb789de6c>,
 <Martel.Expression.Seq instance at 0xb78a404c>,
 <Martel.Expression.Seq instance at 0xb78a412c>,
 <Martel.Expression.Seq instance at 0xb78a422c>,
 <Martel.Expression.Seq instance at 0xb78a440c>,
 <Martel.Expression.Seq instance at 0xb78a45cc>,
...                                                                    

ncbi_term

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb78a4dac>                         

ncbi_word

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb78a4cec>                       

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb78a338c>                       

seqline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb78a320c>                         

seqline_nonewline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb78a324c>                         

sequence

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb78a332c>                       

title

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb78a310c>                         

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