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Package Bio :: Package HMM :: Module Utilities |
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Generic functions which are useful for working with HMMs.
This just collects general functions which you might like to use in dealing with HMMs.Function Summary | |
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Print out a state sequence prediction in a nice manner. |
Function Details |
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pretty_print_prediction(emissions, real_state, predicted_state, emission_title='Emissions', real_title='Real State', predicted_title='Predicted State', line_width=75)Print out a state sequence prediction in a nice manner. Arguments: o emissions -- The sequence of emissions of the sequence you are dealing with. o real_state -- The actual state path that generated the emissions. o predicted_state -- A state path predicted by some kind of HMM model. |
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