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hetparse |
This package is still being developed.
Please ignore this program until further details can be documented.
All further queries should go to Jon Ison. (Jon Ison)
% hetparse
EMBOSS An error in ajacd.c at line 1531: acdfile '/packages/emboss_dev/gwilliam/emboss/emboss/emboss/acd/hetparse.acd' not opened |
EMBOSS An error in ajacd.c at line 1531: acdfile '/packages/emboss_dev/gwilliam/emboss/emboss/emboss/acd/hetparse.acd' not opened
Program name | Description |
---|---|
aaindexextract | Extract data from AAINDEX |
cutgextract | Extract data from CUTG |
domainer | Reads protein coordinate files and writes domain coordinate files |
funky | Reads clean coordinate files and writes file of protein-heterogen contact data |
nrscope | Converts redundant EMBL-format SCOP file to non-redundant one |
pdbparse | Parses pdb files and writes cleaned-up protein coordinate files |
pdbtosp | Convert raw swissprot:pdb equivalence file to embl-like format |
printsextract | Extract data from PRINTS |
prosextract | Builds the PROSITE motif database for patmatmotifs to search |
rebaseextract | Extract data from REBASE |
scope | Convert raw scop classification file to embl-like format |
scopnr | Removes redundant domains from a scop classification file |
scopparse | Converts raw scop classification files to a file in embl-like format |
scopseqs | Adds pdb and swissprot sequence records to a scop classification file |
seqnr | Reads a scop families file and a scop ambiguities file and writes (i) a non-redundant scop families file and (ii) a scop validation file |
tfextract | Extract data from TRANSFAC |