plot.svb {sma} | R Documentation |
Produces a scatter plot of background corrected signal intensities and background intensities.
plot.svb(x, channel="R", image.id=1, S.isbgcor=FALSE, ...)
x |
a numeric list of signal and background intensities, can be raw or background corrected data. |
channel |
the specific channel to which the intensities to be considered, correspond to, that is, either red or green. The default channel is red. |
image.id |
integer value; the index of the slide which is considered |
S.isbgcor |
logical flag, equal to TRUE if the signal intensities in x contain background corrected signal intensities instead of raw signal intensities. By default this is set to FALSE. |
... |
graphical parameters may also be supplied as arguments
to the function (see par ). |
a plot is created on the current graphics device.
Yee Hwa Yang, yeehwa@stat.berkeley.edu
Sandrine Dudoit, sandrine@stat.berkeley.edu
Jessica Mar
plot
.
data(MouseArray) # mouse.setup <- init.grid() # mouse.data <- init.data() ## see \emph{init.data} plot.svb(mouse.data, "green", 3) ## thiscreates a plot of the signal versus background intensities ## for the green channel, using data collected from the third slide.