hdf5.readcel {rhdf5}R Documentation

Read and Affymetrix CEL file into an HDF5 file

Description

Reads data in the Affymetrix CEL file format into an HDF5 dataset.

Usage

hdf5.readcel(set, file, create=hdf5.default.properties)

Arguments

set An HDF5 group that will contain the CEL file.
file The name of the file on disk.
create The properties to be used when creating the HDF5 dataset.

Details

Three datasets are created in the group. They are Mean, Stdev and Npix, corresponding to the three pieces of information provided by Affymetrix.

Value

No value is returned. The function is executed for the side effect of creating the HDF5 data sets.

Author(s)

B. Ellis

See Also

hdf5

Examples

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[Package rhdf5 version 1.4.0 Index]