getArrayLayoutLimma {RMAGEML} | R Documentation |
This function gets the genes dataframe.
getArrayLayoutLimma( mageOM, DED = "none" )
mageOM |
Reference to MAGE Object Model |
DED |
the DesinElement Dimension |
Steffen Durinck, http://www.esat.kuleuven.ac.be/~sdurinck
Joke Allemeersch, http://www.esat.kuleuven.ac.be/~jallemee.
Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr and Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046.
data<-system.file("MAGEMLdata", package="RMAGEML") #To obtain a marrayInfo object containing the database identifiers of the features present on the array.# mageom<-importMAGEOM(directory=data) getArrayLayoutLimma(mageom, DED="DED:707")