ProbeSet-class {affy} | R Documentation |
A simple class that contains the PM and MM data for a probe set from one or more samples
Objects can be created by applying the method probeset
to
instances of AffyBatch.
id
:"character"
containing the
probeset IDpm
:"matrix"
containing the PM
intensities. Columns represent samples and rows the different probes.mm
:"matrix"
containing the MM intensitiessignature(x = "ProbeSet")
: the column names
of the pm
matrices which are the sample namessignature(x = "ProbeSet",
pmcorrect = "character", summary = "character")
: applies a summary statistic to the probe set.signature(object = "ProbeSet")
: the column names
of the pm
matrices which are the sample namesMore details are cotained in the vignette
data(affybatch.example) ps <- probeset(affybatch.example,geneNames(affybatch.example)[1:2]) names(ps) print(ps[[1]])