Diagnostic plots for cDNA microarray data


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Documentation for package `marrayPlots' version 1.1.13

User Guides and Package Vignettes

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Help Pages

boxplot,marrayNorm-method Boxplots for cDNA microarray spot statistics
boxplot,marrayRaw-method Boxplots for cDNA microarray spot statistics
image,marrayNorm-method Color image for cDNA microarray spot statistics
image,marrayRaw-method Color image for cDNA microarray spot statistics
maBoxplot Boxplots for cDNA microarray spot statistics
maColorBar Calibration bar for color images
maDefaultPar Default graphical parameters for microarray objects
maDiagnPlots Basic diagnostic plots
maDiagnPlots1 Basic diagnostic plots
maDotPlots Produce a dot plot for replicated controls genes
maDotsDefaults Replace graphical default parameters by user supplied parameters
maImage Color image for cDNA microarray spot statistics
maImage.func Color image for cDNA microarray spot statistics
maLegendLines Add a legend to a plot
maLoessLines Add smoothed fits to a plot
maLowessLines Add smoothed fits to a plot
maNormPlots Basic diagnostic plots
maPalette Microarray color palette
maPlot Scatter-plots for cDNA microarray spot statistics
maPlot.func Scatter-plots with fitted curves and text
maRawPlots Basic diagnostic plots
maText Highlight points on a plot
maTop Identify extreme values