barplot.ProbeSet {affy} | R Documentation |
show a ProbeSet as barplots
Description
displays the probe intensities in a ProbeSet as a barplots
Usage
barplot.ProbeSet(height, xlab = "Probe pair", ylab = "Intensity", main =
NA, col.pm = "red", col.mm = "blue", beside = TRUE, names.arg = "pp",
ask = TRUE, scale, ...)
Arguments
height |
an object of class ProbeSet |
xlab |
label for x axis |
ylab |
label for y axis |
main |
main label for the figure |
col.pm |
color for the `pm' intensities |
col.mm |
color for the `mm' intensities |
beside |
bars beside eachothers or not |
names.arg |
|
ask |
ask before ploting the next barplot |
scale |
put all the barplot to the same scale |
... |
extra parameters to be passed to barplot |
Details
Examples
data(affybatch.example)
gn <- geneNames(affybatch.example)
pps <- probeset(affybatch.example, gn[1])[[1]]
barplot.ProbeSet(pps)
[Package
affy version 1.4.32
Index]