alongChrom |
A function for plotting expression data from an exprset for a given chromosome. |
amplicon.plot |
Create an amplicon plot |
buildACMainLabel |
A function for plotting expression data from an exprset for a given chromosome. |
cColor |
A function for marking specific probes on a cPlot. |
colorRamp |
Extend a color palette to a color ramp |
colorRampPalette |
Extend a color palette to a color ramp |
cPlot |
A plotting function for chromosomes. |
cScale |
A function for mapping chromosome length to a number of points. |
cullACXPoints |
A function for plotting expression data from an exprset for a given chromosome. |
dChip.colors |
A function to get the Red-Blue color scheme used by dChip |
defMapFun |
A function to plot a graph colored by expression data |
dispACXaxis |
A function for plotting expression data from an exprset for a given chromosome. |
doACCumPlot |
A function for plotting expression data from an exprset for a given chromosome. |
doACImagePlot |
A function for plotting expression data from an exprset for a given chromosome. |
doACLocalPlot |
A function for plotting expression data from an exprset for a given chromosome. |
doACMatPlot |
A function for plotting expression data from an exprset for a given chromosome. |
emptyACPlot |
A function for plotting expression data from an exprset for a given chromosome. |
eset133a |
A dataset of class exprSet |
fixACPhysPoints |
A function for plotting expression data from an exprset for a given chromosome. |
getACClosestPos |
A function for plotting expression data from an exprset for a given chromosome. |
getACDataEnv |
A function for plotting expression data from an exprset for a given chromosome. |
getACExprs |
A function for plotting expression data from an exprset for a given chromosome. |
getACGeneSyms |
A function for plotting expression data from an exprset for a given chromosome. |
getACPlotLabs |
A function for plotting expression data from an exprset for a given chromosome. |
getACStrandVals |
A function for plotting expression data from an exprset for a given chromosome. |
GetColor |
A function to get the Red-Blue color scheme used by dChip |
getPlotExpressionColors |
A function to plot a graph colored by expression data |
greenred.colors |
A function to get the Red-Blue color scheme used by dChip |
highlightACDups |
A function for plotting expression data from an exprset for a given chromosome. |
identifyLines |
A function for identifying sample lines on an alongChrom() plot. |
limitACXRange |
A function for plotting expression data from an exprset for a given chromosome. |
make.chromOrd |
Make a chromOrd object |
Makesense |
Produce Smoothed Sense/Anti-sense For All Chromosomes |
Makesense,exprSet-method |
Produce Smoothed Sense/Anti-sense For All Chromosomes |
Makesense,matrix-method |
Produce Smoothed Sense/Anti-sense For All Chromosomes |
plotChr |
Plot Smoothed Sense/Anti-sense of Specified Chromosomes |
plotExpressionGraph |
A function to plot a graph colored by expression data |
scaleACData |
A function for plotting expression data from an exprset for a given chromosome. |