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Package Bio :: Package config :: Module DBRegistry :: Class BioSQLDB |
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RegisterableObject
--+ |DBObject
--+ | BioSQLDB
Represent a BioSQL-style database to retrieve SeqRecord objects.
This returns a SeqRecord-like object from _get() instead of a handle (since BioSQL is not going to give you a handle).Method Summary | |
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Intialize with information for connecting to the BioSQL db. | |
Inherited from DBObject | |
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S.get(key[, default]) -> data | |
S.get_as(key[, to_io][, default]) -> object | |
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Method Details |
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__init__(self,
name,
doc='',
db_host='localhost',
db_port='',
db_user='root',
db_passwd='',
sql_db='',
namespace_db='',
db_type='mysql')
Intialize with information for connecting to the BioSQL db.
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