Package Bio :: Package Wise
[show private | hide private]
[frames | no frames]

Package Bio.Wise

Submodules

Function Summary
  align(cmdline, pair, kbyte, force_type, dry_run, quiet, debug)
Returns a filehandle
  all_pairs(singles)
Generate pairs list for all-against-all alignments
  main()

Variable Summary
str __version__ = '$Revision: 1.12 $'

Function Details

align(cmdline, pair, kbyte=None, force_type=None, dry_run=False, quiet=False, debug=False)

Returns a filehandle

all_pairs(singles)

Generate pairs list for all-against-all alignments
>>> all_pairs(range(4))
[(0, 1), (0, 2), (0, 3), (1, 2), (1, 3), (2, 3)]

Variable Details

__version__

Type:
str
Value:
'$Revision: 1.12 $'                                                    

Generated by Epydoc 2.1 on Sat Jul 16 15:48:59 2005 http://epydoc.sf.net